Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : RPI    

Bonds between two atoms of the molecule

Total Number of Bonds: 30


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O2P P O P doub 1.48 N N
2 NH2 P N P sing 1.64 N N
3 NH2 CZ N C sing 1.37 N N
4 O1P P O P sing 1.61 N N
5 NH1 CZ N C doub 1.3 N N
6 P O3P P O sing 1.61 N N
7 CZ NE C N sing 1.38 N N
8 NE CD N C sing 1.46 N N
9 CD CG C C sing 1.53 N N
10 CG CB C C sing 1.53 N N
11 CB CA C C sing 1.53 N N
12 CA C C C sing 1.51 N N
13 CA N C N sing 1.47 N N
14 O C O C doub 1.21 N N
15 C OXT C O sing 1.34 N N
16 N H N H sing 1.01 N N
17 N H2 N H sing 1.01 N N
18 CA HA C H sing 1.09 N N
19 CB H5 C H sing 1.09 N N
20 CB H6 C H sing 1.09 N N
21 CG H7 C H sing 1.09 N N
22 CG H8 C H sing 1.09 N N
23 CD H9 C H sing 1.09 N N
24 CD H10 C H sing 1.09 N N
25 NE H11 N H sing 0.97 N N
26 NH1 H12 N H sing 0.97 N N
27 NH2 H14 N H sing 0.97 N N
28 O1P H15 O H sing 0.97 N N
29 O3P H16 O H sing 0.97 N N
30 OXT HXT O H sing 0.97 N N