Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : R2A    

Bonds between two atoms of the molecule

Total Number of Bonds: 102


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C19 C18 C C sing 1.51 N N
2 C18 C17 C C doub 1.37 N Y
3 C18 C20 C C sing 1.39 N Y
4 C17 C16 C C sing 1.4 N Y
5 C20 C21 C C doub 1.38 N Y
6 C16 C11 C C sing 1.46 N Y
7 C16 C22 C C doub 1.41 N Y
8 C12 C11 C C sing 1.51 N N
9 C12 C13 C C sing 1.51 N N
10 O14 C13 O C doub 1.21 N N
11 C21 C22 C C sing 1.39 N Y
12 C11 C10 C C doub 1.36 N Y
13 C13 O15 C O sing 1.34 N N
14 C22 O23 C O sing 1.35 N Y
15 C10 O23 C O sing 1.35 N Y
16 C10 C09 C C sing 1.43 N N
17 C09 C08 C C trip 1.17 N N
18 C08 C07 C C sing 1.43 N N
19 C07 C06 C C doub 1.4 N Y
20 C07 C24 C C sing 1.4 N Y
21 C06 C05 C C sing 1.38 N Y
22 C24 C03 C C doub 1.39 N Y
23 C05 C04 C C doub 1.38 N Y
24 C03 C04 C C sing 1.4 N Y
25 C03 C02 C C sing 1.48 N N
26 O01 C02 O C doub 1.21 N N
27 C02 N25 C N sing 1.35 N N
28 N25 C57 N C sing 1.47 N N
29 N25 C26 N C sing 1.47 N N
30 C57 C56 C C sing 1.53 N N
31 C26 C27 C C sing 1.53 N N
32 C56 N28 C N sing 1.47 N N
33 C27 N28 C N sing 1.47 N N
34 N28 C29 N C sing 1.47 N N
35 C29 C30 C C sing 1.53 N N
36 C30 N31 C N sing 1.46 N N
37 N31 C32 N C sing 1.35 N N
38 C32 O55 C O doub 1.22 N N
39 C32 C33 C C sing 1.48 N N
40 C54 C33 C C doub 1.4 N Y
41 C54 C53 C C sing 1.38 N Y
42 C33 C34 C C sing 1.39 N Y
43 C53 C52 C C doub 1.38 N Y
44 C34 C35 C C doub 1.4 N Y
45 C52 C35 C C sing 1.4 N Y
46 C35 C36 C C sing 1.43 N N
47 C36 C37 C C trip 1.17 N N
48 C37 C38 C C sing 1.43 N N
49 O51 C38 O C sing 1.35 N Y
50 O51 C50 O C sing 1.35 N Y
51 C38 C39 C C doub 1.36 N Y
52 O42 C41 O C doub 1.21 N N
53 C50 C49 C C doub 1.39 N Y
54 C50 C44 C C sing 1.41 N Y
55 C39 C40 C C sing 1.51 N N
56 C39 C44 C C sing 1.46 N Y
57 C49 C48 C C sing 1.38 N Y
58 C40 C41 C C sing 1.51 N N
59 C41 O43 C O sing 1.34 N N
60 C44 C45 C C doub 1.4 N Y
61 C48 C46 C C doub 1.39 N Y
62 C45 C46 C C sing 1.37 N Y
63 C46 C47 C C sing 1.51 N N
64 C17 H171 C H sing 1.08 N N
65 C20 H201 C H sing 1.08 N N
66 C21 H211 C H sing 1.08 N N
67 C24 H241 C H sing 1.08 N N
68 C26 H261 C H sing 1.09 N N
69 C26 H262 C H sing 1.09 N N
70 C04 H041 C H sing 1.08 N N
71 C05 H051 C H sing 1.08 N N
72 C06 H061 C H sing 1.08 N N
73 C12 H121 C H sing 1.09 N N
74 C12 H122 C H sing 1.09 N N
75 C19 H193 C H sing 1.09 N N
76 C19 H192 C H sing 1.09 N N
77 C19 H191 C H sing 1.09 N N
78 C27 H271 C H sing 1.09 N N
79 C27 H272 C H sing 1.09 N N
80 C29 H291 C H sing 1.09 N N
81 C29 H292 C H sing 1.09 N N
82 C30 H302 C H sing 1.09 N N
83 C30 H301 C H sing 1.09 N N
84 C34 H341 C H sing 1.08 N N
85 C40 H402 C H sing 1.09 N N
86 C40 H401 C H sing 1.09 N N
87 C45 H451 C H sing 1.08 N N
88 C47 H473 C H sing 1.09 N N
89 C47 H471 C H sing 1.09 N N
90 C47 H472 C H sing 1.09 N N
91 C48 H481 C H sing 1.08 N N
92 C49 H491 C H sing 1.08 N N
93 C52 H521 C H sing 1.08 N N
94 C53 H531 C H sing 1.08 N N
95 C54 H541 C H sing 1.08 N N
96 C56 H562 C H sing 1.09 N N
97 C56 H561 C H sing 1.09 N N
98 C57 H571 C H sing 1.09 N N
99 C57 H572 C H sing 1.09 N N
100 N31 H311 N H sing 0.97 N N
101 O15 H2 O H sing 0.97 N N
102 O43 H3 O H sing 0.97 N N