Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PLV    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N C4A N C sing 1.47 N N
3 N HN N H sing 1.01 N N
4 CA CB C C sing 1.53 N N
5 CA C C C sing 1.51 N N
6 CA HA C H sing 1.09 N N
7 CB OG C O sing 1.43 N N
8 CB HB1 C H sing 1.09 N N
9 CB HB2 C H sing 1.09 N N
10 OG C7 O C sing 1.43 N N
11 C O C O sing 1.34 N N
12 C OXT C O doub 1.21 N N
13 O HO O H sing 0.97 N N
14 N1 C2 N C doub 1.32 N Y
15 N1 C6 N C sing 1.32 N Y
16 C2 C2A C C sing 1.51 N N
17 C2 C3 C C sing 1.39 N Y
18 C2A H2A1 C H sing 1.09 N N
19 C2A H2A2 C H sing 1.09 N N
20 C2A H2A3 C H sing 1.09 N N
21 C3 O3 C O sing 1.36 N N
22 C3 C4 C C doub 1.39 N Y
23 O3 HO3 O H sing 0.97 N N
24 C4 C4A C C sing 1.51 N N
25 C4 C5 C C sing 1.39 N Y
26 C4A H4A1 C H sing 1.09 N N
27 C4A H4A2 C H sing 1.09 N N
28 C5 C6 C C doub 1.38 N Y
29 C5 C5A C C sing 1.51 N N
30 C6 H6 C H sing 1.08 N N
31 C5A O4P C O sing 1.43 N N
32 C5A H5A1 C H sing 1.09 N N
33 C5A H5A2 C H sing 1.09 N N
34 O4P P O P sing 1.61 N N
35 P O1P P O sing 1.61 N N
36 P O2P P O sing 1.61 N N
37 P O3P P O doub 1.48 N N
38 O1P H1P O H sing 0.97 N N
39 O2P H2P O H sing 0.97 N N
40 C7 H71 C H sing 1.09 N N
41 C7 H72 C H sing 1.09 N N
42 C7 H73 C H sing 1.09 N N