Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : P8Q    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N3 C9 N C sing 1.4 N N
2 C9 C8 C C doub 1.39 N Y
3 C9 C18 C C sing 1.39 N Y
4 C8 C7 C C sing 1.38 N Y
5 C18 C19 C C doub 1.38 N Y
6 CL C24 CL C sing 1.74 N N
7 C7 C6 C C doub 1.39 N Y
8 C23 C24 C C doub 1.38 N Y
9 C23 C22 C C sing 1.38 N Y
10 C19 C6 C C sing 1.39 N Y
11 C6 N2 C N sing 1.4 N N
12 C24 C25 C C sing 1.39 N Y
13 C22 C21 C C doub 1.39 N Y
14 N2 C5 N C sing 1.35 N N
15 C25 C26 C C doub 1.38 N Y
16 C21 C26 C C sing 1.39 N Y
17 C21 C20 C C sing 1.48 N N
18 C5 O C O doub 1.21 N N
19 C5 C4 C C sing 1.51 N N
20 N5 C20 N C doub 1.29 N N
21 N5 C3 N C sing 1.47 N N
22 C20 C27 C C sing 1.48 N N
23 C4 C3 C C sing 1.53 N N
24 C3 C2 C C sing 1.51 N N
25 C29 C28 C C sing 1.51 N N
26 C27 C28 C C sing 1.45 N Y
27 C27 C32 C C doub 1.38 N Y
28 C2 N1 C N doub 1.3 N Y
29 C2 N6 C N sing 1.36 N Y
30 C28 C30 C C doub 1.32 N Y
31 N1 N N N sing 1.29 N Y
32 N6 C32 N C sing 1.4 N N
33 N6 C1 N C sing 1.35 N Y
34 C32 S C S sing 1.71 N Y
35 N C1 N C doub 1.31 N Y
36 C30 C31 C C sing 1.51 N N
37 C30 S C S sing 1.75 N Y
38 C1 C C C sing 1.51 N N
39 C4 H1 C H sing 1.09 N N
40 C4 H2 C H sing 1.09 N N
41 C7 H3 C H sing 1.08 N N
42 C8 H4 C H sing 1.08 N N
43 N2 H5 N H sing 0.97 N N
44 N3 H6 N H sing 0.97 N N
45 C23 H8 C H sing 1.08 N N
46 C22 H9 C H sing 1.08 N N
47 C25 H10 C H sing 1.08 N N
48 C26 H11 C H sing 1.08 N N
49 C31 H12 C H sing 1.09 N N
50 C31 H13 C H sing 1.09 N N
51 C31 H14 C H sing 1.09 N N
52 C29 H15 C H sing 1.09 N N
53 C29 H16 C H sing 1.09 N N
54 C29 H17 C H sing 1.09 N N
55 C H18 C H sing 1.09 N N
56 C H19 C H sing 1.09 N N
57 C H20 C H sing 1.09 N N
58 C3 H21 C H sing 1.09 N N
59 C19 H22 C H sing 1.08 N N
60 C18 H23 C H sing 1.08 N N
61 N3 C10 N C sing 1.35 N N
62 C10 O1 C O doub 1.21 N N
63 C10 C12 C C sing 1.51 N N
64 C12 C11 C C sing 1.53 N N
65 C11 C13 C C sing 1.53 N N
66 C13 C14 C C sing 1.53 N N
67 C14 C15 C C sing 1.53 N N
68 C15 C16 C C sing 1.53 N N
69 C16 C17 C C sing 1.51 N N
70 C17 N4 C N sing 1.35 N N
71 C17 O2 C O doub 1.21 N N
72 C12 H7 C H sing 1.09 N N
73 C12 H24 C H sing 1.09 N N
74 C11 H25 C H sing 1.09 N N
75 C11 H26 C H sing 1.09 N N
76 C13 H27 C H sing 1.09 N N
77 C13 H28 C H sing 1.09 N N
78 C14 H29 C H sing 1.09 N N
79 C14 H30 C H sing 1.09 N N
80 C15 H31 C H sing 1.09 N N
81 C15 H32 C H sing 1.09 N N
82 C16 H33 C H sing 1.09 N N
83 C16 H34 C H sing 1.09 N N
84 N4 H35 N H sing 0.97 N N
85 N4 O3 N O sing 1.42 N N
86 O3 H36 O H sing 0.97 N N