data_P8Q
#
_chem_comp.id P8Q
_chem_comp.name
(S)-N1-(4-(2-(4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetamido)phenyl)-N8-hydroxyoctanediamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H36 Cl N7 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms TW12
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-04-17
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 662.201
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code P8Q
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6YQO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P8Q C4 C1 C 0 1 N N N N N N 32.733 14.693 -2.533 3.768 2.187 -0.229 C4 P8Q 1
P8Q C5 C2 C 0 1 N N N N N N 32.414 13.638 -3.583 2.307 2.090 -0.589 C5 P8Q 2
P8Q C6 C3 C 0 1 Y N N N N N 33.193 12.789 -5.799 0.021 2.543 -0.105 C6 P8Q 3
P8Q N1 N1 N 0 1 Y N N N N N 32.803 16.923 -0.629 6.952 2.482 -1.756 N1 P8Q 4
P8Q C7 C4 C 0 1 Y N N N N N 34.103 12.993 -6.828 -0.329 2.779 -1.429 C7 P8Q 5
P8Q C8 C5 C 0 1 Y N N N N N 34.054 12.214 -7.971 -1.658 2.788 -1.800 C8 P8Q 6
P8Q N2 N2 N 0 1 N N N N N N 33.244 13.631 -4.656 1.370 2.534 0.271 N2 P8Q 7
P8Q C9 C6 C 0 1 Y N N N N N 33.097 11.216 -8.102 -2.646 2.562 -0.850 C9 P8Q 8
P8Q N3 N3 N 0 1 N N N N N N 33.045 10.417 -9.267 -3.995 2.572 -1.227 N3 P8Q 9
P8Q CL CL1 CL 0 0 N N N N N N 25.705 18.035 -6.834 2.857 -6.323 -1.514 CL P8Q 10
P8Q C24 C7 C 0 1 Y N N N N N 26.740 17.394 -5.591 3.337 -4.679 -1.231 C24 P8Q 11
P8Q C23 C8 C 0 1 Y N N N N N 27.805 16.594 -5.940 4.408 -4.406 -0.397 C23 P8Q 12
P8Q C22 C9 C 0 1 Y N N N N N 28.626 16.091 -4.945 4.793 -3.102 -0.169 C22 P8Q 13
P8Q C25 C10 C 0 1 Y N N N N N 26.475 17.696 -4.277 2.650 -3.644 -1.844 C25 P8Q 14
P8Q C26 C11 C 0 1 Y N N N N N 27.298 17.190 -3.287 3.027 -2.336 -1.623 C26 P8Q 15
P8Q C21 C12 C 0 1 Y N N N N N 28.384 16.383 -3.605 4.102 -2.056 -0.780 C21 P8Q 16
P8Q C20 C13 C 0 1 N N N N N N 29.289 15.875 -2.548 4.511 -0.653 -0.538 C20 P8Q 17
P8Q C27 C14 C 0 1 Y N N N N N 28.733 15.714 -1.160 5.074 -0.338 0.790 C27 P8Q 18
P8Q C32 C15 C 0 1 Y N N N N N 29.399 16.188 -0.051 6.114 0.540 1.015 C32 P8Q 19
P8Q S S1 S 0 1 Y N N N N N 28.481 15.981 1.389 6.522 0.593 2.671 S P8Q 20
P8Q C30 C16 C 0 1 Y N N N N N 27.188 15.233 0.516 5.258 -0.543 3.101 C30 P8Q 21
P8Q C31 C17 C 0 1 N N N N N N 25.956 14.813 1.263 4.968 -1.011 4.503 C31 P8Q 22
P8Q C28 C18 C 0 1 Y N N N N N 27.456 15.131 -0.812 4.594 -0.932 2.026 C28 P8Q 23
P8Q C29 C19 C 0 1 N N N N N N 26.554 14.401 -1.760 3.444 -1.904 2.077 C29 P8Q 24
P8Q N6 N4 N 0 1 Y N N N N N 30.686 16.732 -0.055 6.721 1.306 0.018 N6 P8Q 25
P8Q C2 C20 C 0 1 Y N N N N N 31.699 16.249 -0.860 6.074 1.816 -1.063 C2 P8Q 26
P8Q N N5 N 0 1 Y N N N N N 32.516 17.884 0.336 8.104 2.411 -1.182 N P8Q 27
P8Q C1 C21 C 0 1 Y N N N N N 31.256 17.763 0.668 8.014 1.696 -0.089 C1 P8Q 28
P8Q C C22 C 0 1 N N N N N N 30.537 18.611 1.653 9.133 1.370 0.866 C P8Q 29
P8Q N5 N6 N 0 1 N N N N N N 30.509 15.664 -2.886 4.343 0.184 -1.511 N5 P8Q 30
P8Q C3 C23 C 0 1 N N S N N N 31.431 15.151 -1.863 4.613 1.617 -1.370 C3 P8Q 31
P8Q O O1 O 0 1 N N N N N N 31.464 12.872 -3.450 1.976 1.612 -1.654 O P8Q 32
P8Q C19 C24 C 0 1 Y N N N N N 32.236 11.788 -5.930 -0.966 2.322 0.845 C19 P8Q 33
P8Q C18 C25 C 0 1 Y N N N N N 32.189 11.009 -7.072 -2.296 2.326 0.473 C18 P8Q 34
P8Q H1 H1 H 0 1 N N N N N N 33.406 14.265 -1.775 4.034 3.231 -0.067 H1 P8Q 35
P8Q H2 H2 H 0 1 N N N N N N 33.222 15.554 -3.013 3.956 1.618 0.681 H2 P8Q 36
P8Q H3 H3 H 0 1 N N N N N N 34.853 13.764 -6.736 0.440 2.955 -2.167 H3 P8Q 37
P8Q H4 H4 H 0 1 N N N N N N 34.765 12.383 -8.766 -1.930 2.972 -2.829 H4 P8Q 38
P8Q H5 H5 H 0 1 N N N N N N 33.985 14.303 -4.640 1.630 2.848 1.152 H5 P8Q 39
P8Q H6 H6 H 0 1 N N N N N N 33.666 10.224 -10.027 -4.297 3.162 -1.935 H6 P8Q 40
P8Q H8 H8 H 0 1 N N N N N N 27.998 16.362 -6.977 4.943 -5.217 0.076 H8 P8Q 41
P8Q H9 H9 H 0 1 N N N N N N 29.464 15.464 -5.211 5.629 -2.890 0.482 H9 P8Q 42
P8Q H10 H10 H 0 1 N N N N N N 25.633 18.322 -4.020 1.818 -3.862 -2.497 H10 P8Q 43
P8Q H11 H11 H 0 1 N N N N N N 27.094 17.425 -2.253 2.491 -1.530 -2.102 H11 P8Q 44
P8Q H12 H12 H 0 1 N N N N N N 26.070 15.062 2.328 5.662 -0.535 5.196 H12 P8Q 45
P8Q H13 H13 H 0 1 N N N N N N 25.082 15.341 0.854 3.946 -0.743 4.772 H13 P8Q 46
P8Q H14 H14 H 0 1 N N N N N N 25.813 13.728 1.154 5.085 -2.093 4.557 H14 P8Q 47
P8Q H15 H15 H 0 1 N N N N N N 26.834 13.338 -1.788 3.828 -2.924 2.052 H15 P8Q 48
P8Q H16 H16 H 0 1 N N N N N N 25.512 14.497 -1.421 2.880 -1.751 2.998 H16 P8Q 49
P8Q H17 H17 H 0 1 N N N N N N 26.654 14.833 -2.767 2.791 -1.740 1.220 H17 P8Q 50
P8Q H18 H18 H 0 1 N N N N N N 31.228 19.362 2.065 9.615 0.441 0.558 H18 P8Q 51
P8Q H19 H19 H 0 1 N N N N N N 29.698 19.119 1.156 9.864 2.178 0.859 H19 P8Q 52
P8Q H20 H20 H 0 1 N N N N N N 30.153 17.980 2.468 8.730 1.253 1.872 H20 P8Q 53
P8Q H21 H21 H 0 1 N N N N N N 30.975 14.293 -1.347 4.363 2.128 -2.300 H21 P8Q 54
P8Q H22 H22 H 0 1 N N N N N N 31.525 11.618 -5.135 -0.695 2.143 1.875 H22 P8Q 55
P8Q H23 H23 H 0 1 N N N N N N 31.441 10.235 -7.163 -3.064 2.150 1.212 H23 P8Q 56
P8Q C10 C26 C 0 1 N N N N N N ? ? ? -4.874 1.761 -0.605 C10 P8Q 57
P8Q O1 O2 O 0 1 N N N N N N ? ? ? -4.483 0.958 0.215 O1 P8Q 58
P8Q C12 C27 C 0 1 N N N N N N ? ? ? -6.343 1.852 -0.929 C12 P8Q 59
P8Q C11 C28 C 0 1 N N N N N N ? ? ? -7.114 0.831 -0.091 C11 P8Q 60
P8Q C13 C29 C 0 1 N N N N N N ? ? ? -8.606 0.924 -0.420 C13 P8Q 61
P8Q C14 C30 C 0 1 N N N N N N ? ? ? -9.377 -0.098 0.418 C14 P8Q 62
P8Q C15 C31 C 0 1 N N N N N N ? ? ? -10.869 -0.005 0.089 C15 P8Q 63
P8Q C16 C32 C 0 1 N N N N N N ? ? ? -11.640 -1.027 0.927 C16 P8Q 64
P8Q C17 C33 C 0 1 N N N N N N ? ? ? -13.109 -0.935 0.603 C17 P8Q 65
P8Q N4 N7 N 0 1 N N N N N N ? ? ? -13.988 -1.746 1.225 N4 P8Q 66
P8Q O2 O3 O 0 1 N N N N N N ? ? ? -13.500 -0.132 -0.217 O2 P8Q 67
P8Q H7 H7 H 0 1 N N N N N N ? ? ? -6.703 2.855 -0.701 H7 P8Q 68
P8Q H24 H24 H 0 1 N N N N N N ? ? ? -6.495 1.643 -1.988 H24 P8Q 69
P8Q H25 H25 H 0 1 N N N N N N ? ? ? -6.754 -0.172 -0.319 H25 P8Q 70
P8Q H26 H26 H 0 1 N N N N N N ? ? ? -6.962 1.040 0.968 H26 P8Q 71
P8Q H27 H27 H 0 1 N N N N N N ? ? ? -8.966 1.927 -0.192 H27 P8Q 72
P8Q H28 H28 H 0 1 N N N N N N ? ? ? -8.758 0.714 -1.479 H28 P8Q 73
P8Q H29 H29 H 0 1 N N N N N N ? ? ? -9.017 -1.101 0.190 H29 P8Q 74
P8Q H30 H30 H 0 1 N N N N N N ? ? ? -9.225 0.111 1.477 H30 P8Q 75
P8Q H31 H31 H 0 1 N N N N N N ? ? ? -11.229 0.998 0.317 H31 P8Q 76
P8Q H32 H32 H 0 1 N N N N N N ? ? ? -11.021 -0.214 -0.970 H32 P8Q 77
P8Q H33 H33 H 0 1 N N N N N N ? ? ? -11.280 -2.030 0.699 H33 P8Q 78
P8Q H34 H34 H 0 1 N N N N N N ? ? ? -11.488 -0.817 1.986 H34 P8Q 79
P8Q H35 H35 H 0 1 N N N N N N ? ? ? -13.675 -2.388 1.881 H35 P8Q 80
P8Q O3 O4 O 0 1 N N N N N N ? ? ? -15.368 -1.660 0.920 O3 P8Q 81
P8Q H36 H36 H 0 1 N N N N N N ? ? ? -15.920 -2.281 1.416 H36 P8Q 82
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P8Q N3 C9 SING N N 1
P8Q C9 C8 DOUB Y N 2
P8Q C9 C18 SING Y N 3
P8Q C8 C7 SING Y N 4
P8Q C18 C19 DOUB Y N 5
P8Q CL C24 SING N N 6
P8Q C7 C6 DOUB Y N 7
P8Q C23 C24 DOUB Y N 8
P8Q C23 C22 SING Y N 9
P8Q C19 C6 SING Y N 10
P8Q C6 N2 SING N N 11
P8Q C24 C25 SING Y N 12
P8Q C22 C21 DOUB Y N 13
P8Q N2 C5 SING N N 14
P8Q C25 C26 DOUB Y N 15
P8Q C21 C26 SING Y N 16
P8Q C21 C20 SING N N 17
P8Q C5 O DOUB N N 18
P8Q C5 C4 SING N N 19
P8Q N5 C20 DOUB N N 20
P8Q N5 C3 SING N N 21
P8Q C20 C27 SING N N 22
P8Q C4 C3 SING N N 23
P8Q C3 C2 SING N N 24
P8Q C29 C28 SING N N 25
P8Q C27 C28 SING Y N 26
P8Q C27 C32 DOUB Y N 27
P8Q C2 N1 DOUB Y N 28
P8Q C2 N6 SING Y N 29
P8Q C28 C30 DOUB Y N 30
P8Q N1 N SING Y N 31
P8Q N6 C32 SING N N 32
P8Q N6 C1 SING Y N 33
P8Q C32 S SING Y N 34
P8Q N C1 DOUB Y N 35
P8Q C30 C31 SING N N 36
P8Q C30 S SING Y N 37
P8Q C1 C SING N N 38
P8Q C4 H1 SING N N 39
P8Q C4 H2 SING N N 40
P8Q C7 H3 SING N N 41
P8Q C8 H4 SING N N 42
P8Q N2 H5 SING N N 43
P8Q N3 H6 SING N N 44
P8Q C23 H8 SING N N 45
P8Q C22 H9 SING N N 46
P8Q C25 H10 SING N N 47
P8Q C26 H11 SING N N 48
P8Q C31 H12 SING N N 49
P8Q C31 H13 SING N N 50
P8Q C31 H14 SING N N 51
P8Q C29 H15 SING N N 52
P8Q C29 H16 SING N N 53
P8Q C29 H17 SING N N 54
P8Q C H18 SING N N 55
P8Q C H19 SING N N 56
P8Q C H20 SING N N 57
P8Q C3 H21 SING N N 58
P8Q C19 H22 SING N N 59
P8Q C18 H23 SING N N 60
P8Q N3 C10 SING N N 61
P8Q C10 O1 DOUB N N 62
P8Q C10 C12 SING N N 63
P8Q C12 C11 SING N N 64
P8Q C11 C13 SING N N 65
P8Q C13 C14 SING N N 66
P8Q C14 C15 SING N N 67
P8Q C15 C16 SING N N 68
P8Q C16 C17 SING N N 69
P8Q C17 N4 SING N N 70
P8Q C17 O2 DOUB N N 71
P8Q C12 H7 SING N N 72
P8Q C12 H24 SING N N 73
P8Q C11 H25 SING N N 74
P8Q C11 H26 SING N N 75
P8Q C13 H27 SING N N 76
P8Q C13 H28 SING N N 77
P8Q C14 H29 SING N N 78
P8Q C14 H30 SING N N 79
P8Q C15 H31 SING N N 80
P8Q C15 H32 SING N N 81
P8Q C16 H33 SING N N 82
P8Q C16 H34 SING N N 83
P8Q N4 H35 SING N N 84
P8Q N4 O3 SING N N 85
P8Q O3 H36 SING N N 86
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P8Q InChI InChI 1.03 InChI=1S/C33H36ClN7O4S/c1-19-20(2)46-33-30(19)31(22-10-12-23(34)13-11-22)37-26(32-39-38-21(3)41(32)33)18-29(44)36-25-16-14-24(15-17-25)35-27(42)8-6-4-5-7-9-28(43)40-45/h10-17,26,45H,4-9,18H2,1-3H3,(H,35,42)(H,36,44)(H,40,43)/t26-/m0/s1
P8Q InChIKey InChI 1.03 CKKMTTRRFWJCCL-SANMLTNESA-N
P8Q SMILES_CANONICAL CACTVS 3.385 Cc1sc2n3c(C)nnc3[C@H](CC(=O)Nc4ccc(NC(=O)CCCCCCC(=O)NO)cc4)N=C(c5ccc(Cl)cc5)c2c1C
P8Q SMILES CACTVS 3.385 Cc1sc2n3c(C)nnc3[CH](CC(=O)Nc4ccc(NC(=O)CCCCCCC(=O)NO)cc4)N=C(c5ccc(Cl)cc5)c2c1C
P8Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)Nc4ccc(cc4)NC(=O)CCCCCCC(=O)NO)c5ccc(cc5)Cl)C
P8Q SMILES "OpenEye OEToolkits" 2.0.7 Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)Nc4ccc(cc4)NC(=O)CCCCCCC(=O)NO)c5ccc(cc5)Cl)C
#
_pdbx_chem_comp_identifier.comp_id P8Q
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"~{N}-[4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]phenyl]-~{N}'-oxidanyl-octanediamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P8Q 'Create component' 2020-04-17 PDBE
P8Q 'Modify coordinates' 2020-04-22 PDBE
P8Q 'Modify coordinates' 2020-04-23 PDBE
P8Q 'Modify name' 2020-04-23 PDBE
P8Q 'Initial release' 2020-05-06 RCSB
P8Q 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id P8Q
_pdbx_chem_comp_synonyms.name TW12
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id P8Q
_pdbe_chem_comp_synonyms.name TW12
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
P8Q C4 C 11.366 -5.790 1
P8Q C5 C 11.808 -4.357 2
P8Q C6 C 13.712 -2.590 3
P8Q N1 N 10.597 -8.667 4
P8Q C7 C 12.692 -1.490 5
P8Q C8 C 13.134 -0.057 6
P8Q N2 N 13.270 -4.023 7
P8Q C9 C 14.597 0.277 8
P8Q N3 N 15.039 1.710 9
P8Q CL Cl 4.865 0.455 10
P8Q C24 C 5.516 -0.897 11
P8Q C23 C 4.671 -2.136 12
P8Q C22 C 5.321 -3.488 13
P8Q C25 C 7.011 -1.009 14
P8Q C26 C 7.662 -2.361 15
P8Q C21 C 6.817 -3.600 16
P8Q C20 C 7.468 -4.951 17
P8Q C27 C 6.533 -6.124 18
P8Q C32 C 6.867 -7.587 19
P8Q S S 5.585 -8.348 20
P8Q C30 C 4.462 -7.366 21
P8Q C31 C 3.000 -7.700 22
P8Q C28 C 5.047 -5.994 23
P8Q C29 C 4.276 -4.708 24
P8Q N6 N 8.218 -8.237 25
P8Q C2 C 9.569 -7.587 26
P8Q N N 9.889 -9.979 27
P8Q C1 C 8.422 -9.714 28
P8Q C C 7.340 -10.753 29
P8Q N5 N 8.968 -4.951 30
P8Q C3 C 9.903 -6.124 31
P8Q O O 10.787 -3.257 32
P8Q C19 C 15.175 -2.256 33
P8Q C18 C 15.617 -0.823 34
P8Q C10 C 16.501 2.044 35
P8Q O1 O 17.521 0.944 36
P8Q C12 C 16.943 3.477 37
P8Q C11 C 18.406 3.811 38
P8Q C13 C 18.848 5.245 39
P8Q C14 C 20.310 5.578 40
P8Q C15 C 20.752 7.012 41
P8Q C16 C 22.215 7.346 42
P8Q C17 C 22.657 8.779 43
P8Q N4 N 24.119 9.113 44
P8Q O2 O 21.636 9.878 45
P8Q O3 O 24.561 10.546 46
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
P8Q N3 C9 SINGLE NONE 1
P8Q C9 C8 SINGLE NONE 2
P8Q C9 C18 DOUBLE NONE 3
P8Q C8 C7 DOUBLE NONE 4
P8Q C18 C19 SINGLE NONE 5
P8Q CL C24 SINGLE NONE 6
P8Q C7 C6 SINGLE NONE 7
P8Q C23 C24 DOUBLE NONE 8
P8Q C23 C22 SINGLE NONE 9
P8Q C19 C6 DOUBLE NONE 10
P8Q C6 N2 SINGLE NONE 11
P8Q C24 C25 SINGLE NONE 12
P8Q C22 C21 DOUBLE NONE 13
P8Q N2 C5 SINGLE NONE 14
P8Q C25 C26 DOUBLE NONE 15
P8Q C21 C26 SINGLE NONE 16
P8Q C21 C20 SINGLE NONE 17
P8Q C5 O DOUBLE NONE 18
P8Q C5 C4 SINGLE NONE 19
P8Q N5 C20 DOUBLE NONE 20
P8Q N5 C3 SINGLE NONE 21
P8Q C20 C27 SINGLE NONE 22
P8Q C3 C4 SINGLE BEGINWEDGE 23
P8Q C3 C2 SINGLE NONE 24
P8Q C29 C28 SINGLE NONE 25
P8Q C27 C28 SINGLE NONE 26
P8Q C27 C32 DOUBLE NONE 27
P8Q C2 N1 DOUBLE NONE 28
P8Q C2 N6 SINGLE NONE 29
P8Q C28 C30 DOUBLE NONE 30
P8Q N1 N SINGLE NONE 31
P8Q N6 C32 SINGLE NONE 32
P8Q N6 C1 SINGLE NONE 33
P8Q C32 S SINGLE NONE 34
P8Q N C1 DOUBLE NONE 35
P8Q C30 C31 SINGLE NONE 36
P8Q C30 S SINGLE NONE 37
P8Q C1 C SINGLE NONE 38
P8Q N3 C10 SINGLE NONE 39
P8Q C10 O1 DOUBLE NONE 40
P8Q C10 C12 SINGLE NONE 41
P8Q C12 C11 SINGLE NONE 42
P8Q C11 C13 SINGLE NONE 43
P8Q C13 C14 SINGLE NONE 44
P8Q C14 C15 SINGLE NONE 45
P8Q C15 C16 SINGLE NONE 46
P8Q C16 C17 SINGLE NONE 47
P8Q C17 N4 SINGLE NONE 48
P8Q C17 O2 DOUBLE NONE 49
P8Q N4 O3 SINGLE NONE 50
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
P8Q MurckoScaffold S1 scaffold 'O=C(C[C@@H]1N=C(c2ccccc2)c2ccsc2-n2cnnc21)Nc1ccccc1' InChI=1S/C22H17N5OS/c28-19(24-16-9-5-2-6-10-16)13-18-21-26-23-14-27(21)22-17(11-12-29-22)20(25-18)15-7-3-1-4-8-15/h1-12,14,18H,13H2,(H,24,28)/t18-/m0/s1 PZFCMBRBHASKJU-SFHVURJKSA-N
P8Q amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
P8Q phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
P8Q thiophen F3 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
P8Q C4 S1 1
P8Q C5 S1 1
P8Q C6 S1 1
P8Q N1 S1 1
P8Q C7 S1 1
P8Q C8 S1 1
P8Q N2 S1 1
P8Q C9 S1 1
P8Q C24 S1 1
P8Q C23 S1 1
P8Q C22 S1 1
P8Q C25 S1 1
P8Q C26 S1 1
P8Q C21 S1 1
P8Q C20 S1 1
P8Q C27 S1 1
P8Q C32 S1 1
P8Q S S1 1
P8Q C30 S1 1
P8Q C28 S1 1
P8Q N6 S1 1
P8Q C2 S1 1
P8Q N S1 1
P8Q C1 S1 1
P8Q N5 S1 1
P8Q C3 S1 1
P8Q O S1 1
P8Q C19 S1 1
P8Q C18 S1 1
P8Q N2 F1 1
P8Q C5 F1 1
P8Q O F1 1
P8Q C4 F1 1
P8Q N3 F1 2
P8Q H1 F1 2
P8Q H2 F1 2
P8Q H3 F1 2
P8Q H11 F1 3
P8Q H10 F1 3
P8Q H12 F1 3
P8Q H9 F1 3
P8Q C6 F2 1
P8Q C7 F2 1
P8Q C8 F2 1
P8Q C9 F2 1
P8Q C18 F2 1
P8Q C19 F2 1
P8Q C24 F2 2
P8Q C23 F2 2
P8Q C22 F2 2
P8Q C21 F2 2
P8Q C26 F2 2
P8Q C25 F2 2
P8Q C32 F3 1
P8Q C27 F3 1
P8Q C28 F3 1
P8Q C30 F3 1
P8Q S F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id P8Q
_pdbe_chem_comp_rdkit_properties.exactmw 661.224
_pdbe_chem_comp_rdkit_properties.amw 662.216
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 46
_pdbe_chem_comp_rdkit_properties.NumAtoms 82
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.333
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 326.459
_pdbe_chem_comp_rdkit_properties.tpsa 150.600
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.333
_pdbe_chem_comp_rdkit_properties.CrippenMR 175.324
_pdbe_chem_comp_rdkit_properties.chi0v 23.622
_pdbe_chem_comp_rdkit_properties.chi1v 12.970
_pdbe_chem_comp_rdkit_properties.chi2v 6.297
_pdbe_chem_comp_rdkit_properties.chi3v 6.297
_pdbe_chem_comp_rdkit_properties.chi4v 4.408
_pdbe_chem_comp_rdkit_properties.chi0n 58.050
_pdbe_chem_comp_rdkit_properties.chi1n 29.525
_pdbe_chem_comp_rdkit_properties.chi2n 5.119
_pdbe_chem_comp_rdkit_properties.chi3n 5.119
_pdbe_chem_comp_rdkit_properties.chi4n 3.351
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.390
_pdbe_chem_comp_rdkit_properties.kappa1 10.303
_pdbe_chem_comp_rdkit_properties.kappa2 14.801
_pdbe_chem_comp_rdkit_properties.kappa3 7.693
_pdbe_chem_comp_rdkit_properties.Phi 3.315
#
_pdbe_chem_comp_external_mappings.comp_id P8Q
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 146035918
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
P8Q C4 -4.097 -3.490 0.170 ETKDGv3 1
P8Q C5 -2.712 -3.331 -0.394 ETKDGv3 2
P8Q C6 -0.260 -3.075 0.200 ETKDGv3 3
P8Q N1 -3.174 -2.460 2.726 ETKDGv3 4
P8Q C7 0.936 -3.844 0.614 ETKDGv3 5
P8Q C8 2.161 -3.323 0.473 ETKDGv3 6
P8Q N2 -1.564 -3.642 0.409 ETKDGv3 7
P8Q C9 2.338 -1.960 -0.081 ETKDGv3 8
P8Q N3 3.668 -1.444 -0.255 ETKDGv3 9
P8Q CL -4.410 3.729 -5.016 ETKDGv3 10
P8Q C24 -4.607 2.667 -3.634 ETKDGv3 11
P8Q C23 -4.784 1.352 -3.813 ETKDGv3 12
P8Q C22 -4.951 0.461 -2.646 ETKDGv3 13
P8Q C25 -4.573 3.227 -2.268 ETKDGv3 14
P8Q C26 -4.725 2.422 -1.208 ETKDGv3 15
P8Q C21 -4.938 0.962 -1.395 ETKDGv3 16
P8Q C20 -5.101 0.071 -0.219 ETKDGv3 17
P8Q C27 -5.714 0.603 1.031 ETKDGv3 18
P8Q C32 -5.151 0.456 2.237 ETKDGv3 19
P8Q S -6.055 1.362 3.469 ETKDGv3 20
P8Q C30 -7.230 1.949 2.272 ETKDGv3 21
P8Q C31 -8.410 2.800 2.623 ETKDGv3 22
P8Q C28 -6.952 1.444 1.060 ETKDGv3 23
P8Q C29 -7.819 1.687 -0.145 ETKDGv3 24
P8Q N6 -4.025 -0.389 2.499 ETKDGv3 25
P8Q C2 -3.872 -1.692 1.953 ETKDGv3 26
P8Q N -2.773 -1.704 3.834 ETKDGv3 27
P8Q C1 -3.273 -0.520 3.703 ETKDGv3 28
P8Q C -3.078 0.561 4.715 ETKDGv3 29
P8Q N5 -4.630 -1.143 -0.297 ETKDGv3 30
P8Q C3 -4.644 -2.170 0.748 ETKDGv3 31
P8Q O -2.569 -2.912 -1.575 ETKDGv3 32
P8Q C19 -0.101 -1.834 -0.299 ETKDGv3 33
P8Q C18 1.252 -1.263 -0.466 ETKDGv3 34
P8Q H1 -4.776 -3.837 -0.639 ETKDGv3 35
P8Q H2 -4.103 -4.280 0.952 ETKDGv3 36
P8Q H3 0.821 -4.838 1.028 ETKDGv3 37
P8Q H4 3.026 -3.898 0.774 ETKDGv3 38
P8Q H5 -1.675 -4.345 1.174 ETKDGv3 39
P8Q H6 4.442 -2.132 -0.396 ETKDGv3 40
P8Q H8 -4.807 0.933 -4.811 ETKDGv3 41
P8Q H9 -5.100 -0.598 -2.821 ETKDGv3 42
P8Q H10 -4.419 4.288 -2.122 ETKDGv3 43
P8Q H11 -4.682 2.846 -0.213 ETKDGv3 44
P8Q H12 -8.518 3.626 1.889 ETKDGv3 45
P8Q H13 -9.331 2.180 2.624 ETKDGv3 46
P8Q H14 -8.272 3.240 3.632 ETKDGv3 47
P8Q H15 -8.893 1.679 0.136 ETKDGv3 48
P8Q H16 -7.569 2.670 -0.594 ETKDGv3 49
P8Q H17 -7.673 0.889 -0.902 ETKDGv3 50
P8Q H18 -3.088 1.553 4.216 ETKDGv3 51
P8Q H19 -2.102 0.432 5.228 ETKDGv3 52
P8Q H20 -3.892 0.516 5.469 ETKDGv3 53
P8Q H21 -5.695 -2.347 1.063 ETKDGv3 54
P8Q H22 -0.954 -1.224 -0.562 ETKDGv3 55
P8Q H23 1.347 -0.288 -0.924 ETKDGv3 56
P8Q C10 4.024 -0.059 -0.116 ETKDGv3 57
P8Q O1 3.215 0.766 0.389 ETKDGv3 58
P8Q C12 5.403 0.399 -0.485 ETKDGv3 59
P8Q C11 6.368 0.192 0.690 ETKDGv3 60
P8Q C13 7.778 0.723 0.388 ETKDGv3 61
P8Q C14 8.578 -0.221 -0.528 ETKDGv3 62
P8Q C15 9.963 0.353 -0.891 ETKDGv3 63
P8Q C16 9.987 1.081 -2.245 ETKDGv3 64
P8Q C17 9.177 2.343 -2.227 ETKDGv3 65
P8Q N4 7.847 2.358 -2.754 ETKDGv3 66
P8Q O2 9.661 3.388 -1.714 ETKDGv3 67
P8Q H7 5.742 -0.173 -1.374 ETKDGv3 68
P8Q H24 5.370 1.475 -0.763 ETKDGv3 69
P8Q H25 6.418 -0.886 0.959 ETKDGv3 70
P8Q H26 5.974 0.741 1.573 ETKDGv3 71
P8Q H27 8.325 0.821 1.351 ETKDGv3 72
P8Q H28 7.705 1.739 -0.051 ETKDGv3 73
P8Q H29 8.009 -0.454 -1.452 ETKDGv3 74
P8Q H30 8.725 -1.181 0.013 ETKDGv3 75
P8Q H31 10.343 1.023 -0.089 ETKDGv3 76
P8Q H32 10.680 -0.495 -0.961 ETKDGv3 77
P8Q H33 11.039 1.339 -2.492 ETKDGv3 78
P8Q H34 9.622 0.404 -3.047 ETKDGv3 79
P8Q H35 7.429 1.488 -3.153 ETKDGv3 80
P8Q O3 7.096 3.484 -2.698 ETKDGv3 81
P8Q H36 7.269 3.947 -3.557 ETKDGv3 82
#