Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : P1V    

Bonds between two atoms of the molecule

Total Number of Bonds: 31


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C3 C1 C C sing 1.51 N N
2 C1 N1 C N sing 1.34 N Y
3 C1 N3 C N doub 1.31 N Y
4 N1 N2 N N sing 1.4 N Y
5 N3 C2 N C sing 1.33 N Y
6 N2 C2 N C doub 1.31 N Y
7 C2 C4 C C sing 1.51 N N
8 C4 C5 C C sing 1.53 N N
9 C5 C6 C C sing 1.53 N N
10 C6 C7 C C sing 1.53 N N
11 C7 CA C C sing 1.53 N N
12 CA N C N sing 1.47 N N
13 CA C C C sing 1.51 N N
14 O C O C doub 1.21 N N
15 C4 H1 C H sing 1.09 N N
16 C4 H17 C H sing 1.09 N N
17 C5 H3 C H sing 1.09 N N
18 C5 H4 C H sing 1.09 N N
19 C6 H5 C H sing 1.09 N N
20 C6 H6 C H sing 1.09 N N
21 C7 H7 C H sing 1.09 N N
22 C7 H8 C H sing 1.09 N N
23 N1 H9 N H sing 0.97 N N
24 C3 H10 C H sing 1.09 N N
25 C3 H11 C H sing 1.09 N N
26 C3 H12 C H sing 1.09 N N
27 N H N H sing 1.01 N N
28 N H2 N H sing 1.01 N N
29 CA HA C H sing 1.09 N N
30 C OXT C O sing 1.34 N N
31 OXT HXT O H sing 0.97 N N