Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NY9    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O2 C9 O C doub 1.22 N N
2 C1 C C C sing 1.53 N N
3 C1 N C N sing 1.47 N N
4 O C9 O C sing 1.34 N N
5 O C8 O C sing 1.35 N N
6 C9 C10 C C sing 1.41 N N
7 C22 C8 C C doub 1.39 N Y
8 C22 C4 C C sing 1.39 N Y
9 C8 C7 C C sing 1.41 N Y
10 N C4 N C sing 1.39 N N
11 N C2 N C sing 1.46 N N
12 C11 C10 C C sing 1.51 N N
13 C11 C12 C C sing 1.53 N N
14 C10 C20 C C doub 1.36 N N
15 C4 C5 C C doub 1.4 N Y
16 C2 C3 C C sing 1.53 N N
17 C7 C20 C C sing 1.46 N N
18 C7 C6 C C doub 1.4 N Y
19 C20 C21 C C sing 1.51 N N
20 C12 N1 C N sing 1.46 N N
21 C5 C6 C C sing 1.36 N Y
22 N1 C13 N C sing 1.35 N N
23 C13 O1 C O doub 1.22 N N
24 C13 N2 C N sing 1.35 N N
25 N2 C14 N C sing 1.46 N N
26 C14 C15 C C sing 1.51 N N
27 C15 C16 C C doub 1.38 N Y
28 C15 C19 C C sing 1.39 N Y
29 C16 N3 C N sing 1.32 N Y
30 C19 C18 C C doub 1.39 N Y
31 N3 C17 N C doub 1.32 N Y
32 C18 C17 C C sing 1.38 N Y
33 C22 H1 C H sing 1.08 N N
34 C2 H2 C H sing 1.09 N N
35 C2 H3 C H sing 1.09 N N
36 C3 H4 C H sing 1.09 N N
37 C3 H5 C H sing 1.09 N N
38 C3 H6 C H sing 1.09 N N
39 C1 H7 C H sing 1.09 N N
40 C1 H8 C H sing 1.09 N N
41 C H9 C H sing 1.09 N N
42 C H10 C H sing 1.09 N N
43 C H11 C H sing 1.09 N N
44 C21 H12 C H sing 1.09 N N
45 C21 H13 C H sing 1.09 N N
46 C21 H14 C H sing 1.09 N N
47 C6 H15 C H sing 1.08 N N
48 C5 H16 C H sing 1.08 N N
49 C11 H17 C H sing 1.09 N N
50 C11 H18 C H sing 1.09 N N
51 C12 H19 C H sing 1.09 N N
52 C12 H20 C H sing 1.09 N N
53 N1 H21 N H sing 0.97 N N
54 N2 H22 N H sing 0.97 N N
55 C14 H23 C H sing 1.09 N N
56 C14 H24 C H sing 1.09 N N
57 C19 H25 C H sing 1.08 N N
58 C18 H26 C H sing 1.08 N N
59 C17 H27 C H sing 1.08 N N
60 C16 H28 C H sing 1.08 N N