data_NY9
#
_chem_comp.id NY9
_chem_comp.name "N-{2-[7-(diethylamino)-4-methyl-2-oxo-2H-1-benzopyran-3-yl]ethyl}-N'-[(pyridin-3-yl)methyl]urea"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H28 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-08-17
_chem_comp.pdbx_modified_date 2022-02-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 408.493
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code NY9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7RTP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NY9 O2 O1 O 0 1 N N N N N N -6.443 18.630 -37.122 -0.790 -2.393 -1.331 O2 NY9 1
NY9 C9 C1 C 0 1 N N N N N N -5.463 18.396 -36.454 -1.481 -1.432 -1.045 C9 NY9 2
NY9 O O2 O 0 1 N N N N N N -4.426 19.285 -36.547 -2.775 -1.622 -0.745 O NY9 3
NY9 C8 C2 C 0 1 Y N N N N N -3.236 19.085 -35.884 -3.583 -0.590 -0.421 C8 NY9 4
NY9 C22 C3 C 0 1 Y N N N N N -2.261 20.055 -36.073 -4.917 -0.804 -0.114 C22 NY9 5
NY9 C4 C4 C 0 1 Y N N N N N -1.026 19.958 -35.414 -5.730 0.271 0.216 C4 NY9 6
NY9 N N1 N 0 1 N N N N N N 0.026 20.798 -35.750 -7.069 0.056 0.524 N NY9 7
NY9 C2 C5 C 0 1 N N N N N N 1.416 20.638 -35.175 -7.932 1.187 0.873 C2 NY9 8
NY9 C3 C6 C 0 1 N N N N N N 1.494 21.071 -33.735 -8.579 1.746 -0.396 C3 NY9 9
NY9 C1 C7 C 0 1 N N N N N N -0.092 21.770 -36.817 -7.617 -1.303 0.499 C1 NY9 10
NY9 C C8 C 0 1 N N N N N N -0.673 22.964 -36.168 -7.462 -1.941 1.881 C NY9 11
NY9 C10 C9 C 0 1 N N N N N N -5.290 17.230 -35.595 -0.899 -0.148 -1.032 C10 NY9 12
NY9 C20 C10 C 0 1 N N N N N N -4.145 17.040 -34.842 -1.657 0.935 -0.714 C20 NY9 13
NY9 C21 C11 C 0 1 N N N N N N -4.010 15.978 -33.787 -1.059 2.318 -0.694 C21 NY9 14
NY9 C7 C12 C 0 1 Y N N N N N -3.054 17.993 -35.024 -3.069 0.721 -0.393 C7 NY9 15
NY9 C6 C13 C 0 1 Y N N N N N -1.822 17.896 -34.368 -3.902 1.794 -0.058 C6 NY9 16
NY9 C5 C14 C 0 1 Y N N N N N -0.825 18.847 -34.553 -5.213 1.567 0.242 C5 NY9 17
NY9 C11 C15 C 0 1 N N N N N N -6.423 16.247 -35.674 0.560 0.023 -1.369 C11 NY9 18
NY9 C12 C16 C 0 1 N N N N N N -7.549 16.833 -34.830 1.404 -0.211 -0.115 C12 NY9 19
NY9 N1 N2 N 0 1 N N N N N N -7.070 17.449 -33.600 2.822 -0.044 -0.443 N1 NY9 20
NY9 C13 C17 C 0 1 N N N N N N -7.439 17.003 -32.374 3.758 -0.204 0.514 C13 NY9 21
NY9 O1 O3 O 0 1 N N N N N N -8.260 16.105 -32.232 3.425 -0.486 1.649 O1 NY9 22
NY9 N2 N3 N 0 1 N N N N N N -6.836 17.613 -31.327 5.063 -0.050 0.213 N2 NY9 23
NY9 C14 C18 C 0 1 N N N N N N -7.131 17.291 -29.934 6.080 -0.224 1.252 C14 NY9 24
NY9 C15 C19 C 0 1 Y N N N N N -8.485 17.779 -29.480 7.447 0.001 0.660 C15 NY9 25
NY9 C19 C20 C 0 1 Y N N N N N -9.535 16.902 -29.246 8.157 -1.057 0.111 C19 NY9 26
NY9 C18 C21 C 0 1 Y N N N N N -10.791 17.390 -28.929 9.411 -0.804 -0.423 C18 NY9 27
NY9 C17 C22 C 0 1 Y N N N N N -10.959 18.761 -28.845 9.909 0.485 -0.391 C17 NY9 28
NY9 N3 N4 N 0 1 Y N N N N N -9.962 19.634 -29.043 9.206 1.467 0.140 N3 NY9 29
NY9 C16 C23 C 0 1 Y N N N N N -8.756 19.131 -29.352 8.007 1.264 0.651 C16 NY9 30
NY9 H1 H1 H 0 1 N N N N N N -2.454 20.889 -36.731 -5.323 -1.805 -0.132 H1 NY9 31
NY9 H2 H2 H 0 1 N N N N N N 1.706 19.579 -35.242 -8.710 0.853 1.560 H2 NY9 32
NY9 H3 H3 H 0 1 N N N N N N 2.115 21.248 -35.766 -7.336 1.965 1.350 H3 NY9 33
NY9 H4 H4 H 0 1 N N N N N N 2.521 20.935 -33.366 -9.221 2.588 -0.136 H4 NY9 34
NY9 H5 H5 H 0 1 N N N N N N 1.213 22.132 -33.655 -7.801 2.080 -1.083 H5 NY9 35
NY9 H6 H6 H 0 1 N N N N N N 0.804 20.463 -33.131 -9.175 0.968 -0.873 H6 NY9 36
NY9 H7 H7 H 0 1 N N N N N N -0.756 21.397 -37.611 -8.674 -1.264 0.234 H7 NY9 37
NY9 H8 H8 H 0 1 N N N N N N 0.895 22.001 -37.243 -7.079 -1.898 -0.238 H8 NY9 38
NY9 H9 H9 H 0 1 N N N N N N -0.799 23.763 -36.914 -7.869 -2.952 1.863 H9 NY9 39
NY9 H10 H10 H 0 1 N N N N N N -1.652 22.707 -35.737 -6.405 -1.980 2.147 H10 NY9 40
NY9 H11 H11 H 0 1 N N N N N N -0.001 23.311 -35.370 -8.000 -1.345 2.619 H11 NY9 41
NY9 H12 H12 H 0 1 N N N N N N -3.009 16.034 -33.335 -1.159 2.772 -1.680 H12 NY9 42
NY9 H13 H13 H 0 1 N N N N N N -4.772 16.135 -33.009 -1.583 2.929 0.042 H13 NY9 43
NY9 H14 H14 H 0 1 N N N N N N -4.151 14.987 -34.244 -0.004 2.254 -0.428 H14 NY9 44
NY9 H15 H15 H 0 1 N N N N N N -1.642 17.064 -33.703 -3.508 2.800 -0.037 H15 NY9 45
NY9 H16 H16 H 0 1 N N N N N N 0.116 18.739 -34.034 -5.856 2.396 0.500 H16 NY9 46
NY9 H17 H17 H 0 1 N N N N N N -6.751 16.125 -36.717 0.842 -0.697 -2.137 H17 NY9 47
NY9 H18 H18 H 0 1 N N N N N N -6.111 15.272 -35.271 0.731 1.035 -1.739 H18 NY9 48
NY9 H19 H19 H 0 1 N N N N N N -8.073 17.596 -35.424 1.121 0.510 0.653 H19 NY9 49
NY9 H20 H20 H 0 1 N N N N N N -8.250 16.026 -34.569 1.233 -1.222 0.255 H20 NY9 50
NY9 H21 H21 H 0 1 N N N N N N -6.447 18.229 -33.662 3.087 0.182 -1.348 H21 NY9 51
NY9 H22 H22 H 0 1 N N N N N N -6.154 18.320 -31.517 5.328 0.175 -0.693 H22 NY9 52
NY9 H23 H23 H 0 1 N N N N N N -7.096 16.198 -29.814 5.908 0.496 2.052 H23 NY9 53
NY9 H24 H24 H 0 1 N N N N N N -6.362 17.755 -29.299 6.020 -1.235 1.654 H24 NY9 54
NY9 H25 H25 H 0 1 N N N N N N -9.372 15.836 -29.311 7.742 -2.054 0.100 H25 NY9 55
NY9 H26 H26 H 0 1 N N N N N N -11.618 16.718 -28.752 9.992 -1.604 -0.858 H26 NY9 56
NY9 H27 H27 H 0 1 N N N N N N -11.940 19.146 -28.609 10.885 0.691 -0.805 H27 NY9 57
NY9 H28 H28 H 0 1 N N N N N N -7.945 19.826 -29.511 7.459 2.094 1.072 H28 NY9 58
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NY9 O2 C9 DOUB N N 1
NY9 C1 C SING N N 2
NY9 C1 N SING N N 3
NY9 O C9 SING N N 4
NY9 O C8 SING N N 5
NY9 C9 C10 SING N N 6
NY9 C22 C8 DOUB Y N 7
NY9 C22 C4 SING Y N 8
NY9 C8 C7 SING Y N 9
NY9 N C4 SING N N 10
NY9 N C2 SING N N 11
NY9 C11 C10 SING N N 12
NY9 C11 C12 SING N N 13
NY9 C10 C20 DOUB N N 14
NY9 C4 C5 DOUB Y N 15
NY9 C2 C3 SING N N 16
NY9 C7 C20 SING N N 17
NY9 C7 C6 DOUB Y N 18
NY9 C20 C21 SING N N 19
NY9 C12 N1 SING N N 20
NY9 C5 C6 SING Y N 21
NY9 N1 C13 SING N N 22
NY9 C13 O1 DOUB N N 23
NY9 C13 N2 SING N N 24
NY9 N2 C14 SING N N 25
NY9 C14 C15 SING N N 26
NY9 C15 C16 DOUB Y N 27
NY9 C15 C19 SING Y N 28
NY9 C16 N3 SING Y N 29
NY9 C19 C18 DOUB Y N 30
NY9 N3 C17 DOUB Y N 31
NY9 C18 C17 SING Y N 32
NY9 C22 H1 SING N N 33
NY9 C2 H2 SING N N 34
NY9 C2 H3 SING N N 35
NY9 C3 H4 SING N N 36
NY9 C3 H5 SING N N 37
NY9 C3 H6 SING N N 38
NY9 C1 H7 SING N N 39
NY9 C1 H8 SING N N 40
NY9 C H9 SING N N 41
NY9 C H10 SING N N 42
NY9 C H11 SING N N 43
NY9 C21 H12 SING N N 44
NY9 C21 H13 SING N N 45
NY9 C21 H14 SING N N 46
NY9 C6 H15 SING N N 47
NY9 C5 H16 SING N N 48
NY9 C11 H17 SING N N 49
NY9 C11 H18 SING N N 50
NY9 C12 H19 SING N N 51
NY9 C12 H20 SING N N 52
NY9 N1 H21 SING N N 53
NY9 N2 H22 SING N N 54
NY9 C14 H23 SING N N 55
NY9 C14 H24 SING N N 56
NY9 C19 H25 SING N N 57
NY9 C18 H26 SING N N 58
NY9 C17 H27 SING N N 59
NY9 C16 H28 SING N N 60
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NY9 SMILES ACDLabs 12.01 CCN(CC)c1ccc2c(c1)OC(=O)C(CCNC(=O)NCc1cccnc1)=C2C
NY9 InChI InChI 1.03 InChI=1S/C23H28N4O3/c1-4-27(5-2)18-8-9-19-16(3)20(22(28)30-21(19)13-18)10-12-25-23(29)26-15-17-7-6-11-24-14-17/h6-9,11,13-14H,4-5,10,12,15H2,1-3H3,(H2,25,26,29)
NY9 InChIKey InChI 1.03 WLXNTQQMVXKPGD-UHFFFAOYSA-N
NY9 SMILES_CANONICAL CACTVS 3.385 CCN(CC)c1ccc2C(=C(CCNC(=O)NCc3cccnc3)C(=O)Oc2c1)C
NY9 SMILES CACTVS 3.385 CCN(CC)c1ccc2C(=C(CCNC(=O)NCc3cccnc3)C(=O)Oc2c1)C
NY9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCN(CC)c1ccc2c(c1)OC(=O)C(=C2C)CCNC(=O)NCc3cccnc3
NY9 SMILES "OpenEye OEToolkits" 2.0.7 CCN(CC)c1ccc2c(c1)OC(=O)C(=C2C)CCNC(=O)NCc3cccnc3
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NY9 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{2-[7-(diethylamino)-4-methyl-2-oxo-2H-1-benzopyran-3-yl]ethyl}-N'-[(pyridin-3-yl)methyl]urea"
NY9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 1-[2-[7-(diethylamino)-4-methyl-2-oxidanylidene-chromen-3-yl]ethyl]-3-(pyridin-3-ylmethyl)urea
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NY9 'Create component' 2021-08-17 RCSB
NY9 'Initial release' 2022-02-16 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
NY9 O2 O 13.491 -1.479 1
NY9 C9 C 12.192 -0.730 2
NY9 O O 10.893 -1.479 3
NY9 C8 C 9.594 -0.730 4
NY9 C22 C 8.253 -1.531 5
NY9 C4 C 6.894 -0.761 6
NY9 N N 5.598 -1.516 7
NY9 C2 C 5.604 -3.016 8
NY9 C3 C 4.308 -3.771 9
NY9 C1 C 4.296 -0.771 10
NY9 C C 3.000 -1.526 11
NY9 C10 C 12.192 0.771 12
NY9 C20 C 10.893 1.521 13
NY9 C21 C 10.893 3.021 14
NY9 C7 C 9.594 0.771 15
NY9 C6 C 8.253 1.573 16
NY9 C5 C 6.894 0.802 17
NY9 C11 C 13.491 1.521 18
NY9 C12 C 14.790 0.771 19
NY9 N1 N 16.089 1.521 20
NY9 C13 C 17.388 0.771 21
NY9 O1 O 17.388 -0.730 22
NY9 N2 N 18.687 1.521 23
NY9 C14 C 19.986 0.771 24
NY9 C15 C 21.286 1.521 25
NY9 C19 C 21.286 3.021 26
NY9 C18 C 22.585 3.771 27
NY9 C17 C 23.884 3.021 28
NY9 N3 N 23.884 1.521 29
NY9 C16 C 22.585 0.771 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
NY9 O2 C9 DOUBLE NONE 1
NY9 C1 C SINGLE NONE 2
NY9 C1 N SINGLE NONE 3
NY9 O C9 SINGLE NONE 4
NY9 O C8 SINGLE NONE 5
NY9 C9 C10 SINGLE NONE 6
NY9 C22 C8 DOUBLE NONE 7
NY9 C22 C4 SINGLE NONE 8
NY9 C8 C7 SINGLE NONE 9
NY9 N C4 SINGLE NONE 10
NY9 N C2 SINGLE NONE 11
NY9 C11 C10 SINGLE NONE 12
NY9 C11 C12 SINGLE NONE 13
NY9 C10 C20 DOUBLE NONE 14
NY9 C4 C5 DOUBLE NONE 15
NY9 C2 C3 SINGLE NONE 16
NY9 C7 C20 SINGLE NONE 17
NY9 C7 C6 DOUBLE NONE 18
NY9 C20 C21 SINGLE NONE 19
NY9 C12 N1 SINGLE NONE 20
NY9 C5 C6 SINGLE NONE 21
NY9 N1 C13 SINGLE NONE 22
NY9 C13 O1 DOUBLE NONE 23
NY9 C13 N2 SINGLE NONE 24
NY9 N2 C14 SINGLE NONE 25
NY9 C14 C15 SINGLE NONE 26
NY9 C15 C16 SINGLE NONE 27
NY9 C15 C19 DOUBLE NONE 28
NY9 C16 N3 DOUBLE NONE 29
NY9 C19 C18 SINGLE NONE 30
NY9 N3 C17 SINGLE NONE 31
NY9 C18 C17 DOUBLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
NY9 MurckoScaffold S1 scaffold O=C(NCCc1cc2ccccc2oc1=O)NCc1cccnc1 InChI=1S/C18H17N3O3/c22-17-15(10-14-5-1-2-6-16(14)24-17)7-9-20-18(23)21-12-13-4-3-8-19-11-13/h1-6,8,10-11H,7,9,12H2,(H2,20,21,23) FSUDOUALAJUCBH-UHFFFAOYSA-N
NY9 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
NY9 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
NY9 O2 S1 1
NY9 C9 S1 1
NY9 O S1 1
NY9 C8 S1 1
NY9 C22 S1 1
NY9 C4 S1 1
NY9 C10 S1 1
NY9 C20 S1 1
NY9 C7 S1 1
NY9 C6 S1 1
NY9 C5 S1 1
NY9 C11 S1 1
NY9 C12 S1 1
NY9 N1 S1 1
NY9 C13 S1 1
NY9 O1 S1 1
NY9 N2 S1 1
NY9 C14 S1 1
NY9 C15 S1 1
NY9 C19 S1 1
NY9 C18 S1 1
NY9 C17 S1 1
NY9 N3 S1 1
NY9 C16 S1 1
NY9 C8 F1 1
NY9 C22 F1 1
NY9 C4 F1 1
NY9 C5 F1 1
NY9 C6 F1 1
NY9 C7 F1 1
NY9 C17 F2 1
NY9 C18 F2 1
NY9 C19 F2 1
NY9 C15 F2 1
NY9 C16 F2 1
NY9 N3 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id NY9
_pdbe_chem_comp_rdkit_properties.exactmw 408.216
_pdbe_chem_comp_rdkit_properties.amw 408.502
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 58
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.348
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 215.117
_pdbe_chem_comp_rdkit_properties.tpsa 87.470
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.311
_pdbe_chem_comp_rdkit_properties.CrippenMR 115.241
_pdbe_chem_comp_rdkit_properties.chi0v 14.514
_pdbe_chem_comp_rdkit_properties.chi1v 7.579
_pdbe_chem_comp_rdkit_properties.chi2v 3.174
_pdbe_chem_comp_rdkit_properties.chi3v 3.174
_pdbe_chem_comp_rdkit_properties.chi4v 1.912
_pdbe_chem_comp_rdkit_properties.chi0n 42.514
_pdbe_chem_comp_rdkit_properties.chi1n 21.473
_pdbe_chem_comp_rdkit_properties.chi2n 3.174
_pdbe_chem_comp_rdkit_properties.chi3n 3.174
_pdbe_chem_comp_rdkit_properties.chi4n 1.912
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.350
_pdbe_chem_comp_rdkit_properties.kappa1 5.464
_pdbe_chem_comp_rdkit_properties.kappa2 9.914
_pdbe_chem_comp_rdkit_properties.kappa3 4.974
_pdbe_chem_comp_rdkit_properties.Phi 1.805
#
_pdbe_chem_comp_external_mappings.comp_id NY9
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 162624760
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
NY9 O2 0.413 -1.023 -3.699 ETKDGv3 1
NY9 C9 0.898 -0.674 -2.589 ETKDGv3 2
NY9 O 2.211 -1.031 -2.292 ETKDGv3 3
NY9 C8 2.814 -0.645 -1.100 ETKDGv3 4
NY9 C22 4.098 -0.951 -0.877 ETKDGv3 5
NY9 C4 4.768 -0.506 0.367 ETKDGv3 6
NY9 N 6.154 -0.826 0.598 ETKDGv3 7
NY9 C2 7.166 -0.446 -0.398 ETKDGv3 8
NY9 C3 7.336 1.069 -0.435 ETKDGv3 9
NY9 C1 6.546 -1.551 1.816 ETKDGv3 10
NY9 C 6.034 -2.987 1.771 ETKDGv3 11
NY9 C10 0.074 0.094 -1.614 ETKDGv3 12
NY9 C20 0.585 0.403 -0.388 ETKDGv3 13
NY9 C21 -0.261 1.072 0.679 ETKDGv3 14
NY9 C7 2.029 0.119 -0.099 ETKDGv3 15
NY9 C6 2.656 0.550 1.017 ETKDGv3 16
NY9 C5 4.074 0.217 1.260 ETKDGv3 17
NY9 C11 -1.342 0.457 -2.028 ETKDGv3 18
NY9 C12 -2.319 -0.679 -1.703 ETKDGv3 19
NY9 N1 -3.676 -0.319 -2.109 ETKDGv3 20
NY9 C13 -4.485 0.604 -1.367 ETKDGv3 21
NY9 O1 -4.037 1.136 -0.315 ETKDGv3 22
NY9 N2 -5.807 0.917 -1.825 ETKDGv3 23
NY9 C14 -6.697 1.820 -1.099 ETKDGv3 24
NY9 C15 -7.220 1.148 0.141 ETKDGv3 25
NY9 C19 -6.792 1.506 1.363 ETKDGv3 26
NY9 C18 -7.308 0.809 2.557 ETKDGv3 27
NY9 C17 -8.194 -0.181 2.408 ETKDGv3 28
NY9 N3 -8.638 -0.559 1.094 ETKDGv3 29
NY9 C16 -8.199 0.042 0.025 ETKDGv3 30
NY9 H1 4.646 -1.526 -1.612 ETKDGv3 31
NY9 H2 8.149 -0.907 -0.161 ETKDGv3 32
NY9 H3 6.873 -0.813 -1.403 ETKDGv3 33
NY9 H4 6.389 1.555 -0.750 ETKDGv3 34
NY9 H5 8.133 1.337 -1.160 ETKDGv3 35
NY9 H6 7.623 1.443 0.570 ETKDGv3 36
NY9 H7 7.652 -1.572 1.927 ETKDGv3 37
NY9 H8 6.143 -1.041 2.716 ETKDGv3 38
NY9 H9 6.430 -3.503 0.871 ETKDGv3 39
NY9 H10 4.924 -3.000 1.741 ETKDGv3 40
NY9 H11 6.372 -3.533 2.676 ETKDGv3 41
NY9 H12 -0.012 0.671 1.683 ETKDGv3 42
NY9 H13 -1.343 0.876 0.567 ETKDGv3 43
NY9 H14 -0.084 2.168 0.662 ETKDGv3 44
NY9 H15 2.155 1.156 1.758 ETKDGv3 45
NY9 H16 4.549 0.584 2.160 ETKDGv3 46
NY9 H17 -1.374 0.652 -3.122 ETKDGv3 47
NY9 H18 -1.667 1.411 -1.563 ETKDGv3 48
NY9 H19 -2.008 -1.593 -2.255 ETKDGv3 49
NY9 H20 -2.304 -0.922 -0.619 ETKDGv3 50
NY9 H21 -4.090 -0.798 -2.940 ETKDGv3 51
NY9 H22 -6.147 0.493 -2.717 ETKDGv3 52
NY9 H23 -6.162 2.766 -0.862 ETKDGv3 53
NY9 H24 -7.558 2.086 -1.748 ETKDGv3 54
NY9 H25 -6.067 2.301 1.489 ETKDGv3 55
NY9 H26 -6.968 1.097 3.544 ETKDGv3 56
NY9 H27 -8.580 -0.701 3.275 ETKDGv3 57
NY9 H28 -8.554 -0.271 -0.948 ETKDGv3 58
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