Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NXX    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O8N C7N O C doub 1.21 N N
2 C7N O7N C O sing 1.35 N N
3 C7N C3N C C sing 1.48 N N
4 C4N C3N C C doub 1.4 N Y
5 C4N C5N C C sing 1.38 N Y
6 C3N C2N C C sing 1.4 N Y
7 C5N C6N C C doub 1.38 N Y
8 C2N N1N C N doub 1.32 N Y
9 C6N N1N C N sing 1.32 N Y
10 N1N C1M N C sing 1.47 N N
11 C1M C2M C C sing 1.55 N N
12 C1M O4M C O sing 1.44 N N
13 O2M C2M O C sing 1.43 N N
14 O1N PN O P doub 1.48 N N
15 C2M C3M C C sing 1.55 N N
16 O4M C4M O C sing 1.44 N N
17 O5M PN O P sing 1.61 N N
18 O5M C5M O C sing 1.43 N N
19 PN O2N P O sing 1.61 N N
20 PN O3A P O sing 1.61 N N
21 C4M C3M C C sing 1.54 N N
22 C4M C5M C C sing 1.53 N N
23 C3M O3M C O sing 1.43 N N
24 O3A PA O P sing 1.61 N N
25 O2A PA O P doub 1.48 N N
26 O2P C2B O C sing 1.43 N N
27 PA O5B P O sing 1.61 N N
28 PA O1A P O sing 1.61 N N
29 O3B C3B O C sing 1.43 N N
30 C3B C2B C C sing 1.55 N N
31 C3B C4B C C sing 1.54 N N
32 C2B C1B C C sing 1.55 N N
33 O5B C5B O C sing 1.43 N N
34 C5B C4B C C sing 1.53 N N
35 C4B O4B C O sing 1.44 N N
36 C1B O4B C O sing 1.44 N N
37 C1B N9A C N sing 1.47 N N
38 N9A C8A N C sing 1.36 N Y
39 N9A C4A N C sing 1.37 N Y
40 C8A N7A C N doub 1.3 N Y
41 N3A C4A N C doub 1.33 N Y
42 N3A C2A N C sing 1.32 N Y
43 C4A C5A C C sing 1.4 N Y
44 N7A C5A N C sing 1.35 N Y
45 C2A N1A C N doub 1.32 N Y
46 C5A C6A C C doub 1.4 N Y
47 N1A C6A N C sing 1.33 N Y
48 C6A N6A C N sing 1.38 N N
49 O7N HO7N O H sing 0.97 N N
50 C4N H4N C H sing 1.08 N N
51 C5N H5N C H sing 1.08 N N
52 C6N H6N C H sing 1.08 N N
53 C2N H2N C H sing 1.08 N N
54 C1M H1M C H sing 1.09 N N
55 C2M H2M C H sing 1.09 N N
56 O2M HO2M O H sing 0.97 N N
57 C3M H3M C H sing 1.09 N N
58 O3M HO3M O H sing 0.97 N N
59 C4M H4M C H sing 1.09 N N
60 C5M H5M1 C H sing 1.09 N N
61 C5M H5M2 C H sing 1.09 N N
62 O2N HO2N O H sing 0.97 N N
63 O1A HO1A O H sing 0.97 N N
64 C5B H5B1 C H sing 1.09 N N
65 C5B H5B2 C H sing 1.09 N N
66 C4B H4B C H sing 1.09 N N
67 C3B H3B C H sing 1.09 N N
68 O3B HO3B O H sing 0.97 N N
69 C2B H2B C H sing 1.09 N N
70 O2P HO2P O H sing 0.97 N N
71 C1B H1B C H sing 1.09 N N
72 C8A H8A C H sing 1.08 N N
73 N6A H6A1 N H sing 0.97 N N
74 N6A H6A2 N H sing 0.97 N N
75 C2A H2A C H sing 1.08 N N