Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : NVP    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 CA N C sing 1.47 N N
2 N1 C2 N C sing 1.39 N N
3 N1 C15 N C sing 1.38 N N
4 CA CB C C sing 1.53 N N
5 CA CC C C sing 1.53 N N
6 CA HCA C H sing 1.09 N N
7 CB CC C C sing 1.53 N N
8 CB HCB1 C H sing 1.09 N N
9 CB HCB2 C H sing 1.09 N N
10 CC HCC1 C H sing 1.09 N N
11 CC HCC2 C H sing 1.09 N N
12 N3 C4 N C doub 1.32 N Y
13 N3 C2 N C sing 1.33 N Y
14 C4 C5 C C sing 1.38 N Y
15 C4 HC4 C H sing 1.08 N N
16 C5 C6 C C doub 1.39 N Y
17 C5 HC5 C H sing 1.08 N N
18 C6 CD C C sing 1.51 N N
19 C6 C7 C C sing 1.39 N Y
20 CD HCD1 C H sing 1.09 N N
21 CD HCD2 C H sing 1.09 N N
22 CD HCD3 C H sing 1.09 N N
23 C2 C7 C C doub 1.39 N Y
24 C7 N8 C N sing 1.39 N N
25 N8 C9 N C sing 1.32 N N
26 N8 HN8 N H sing 0.97 N N
27 C9 OE C O doub 1.22 N N
28 C9 C10 C C sing 1.46 N N
29 C10 C15 C C doub 1.4 N Y
30 C10 C11 C C sing 1.4 N Y
31 C15 N14 C N sing 1.32 N Y
32 C11 C12 C C doub 1.38 N Y
33 C11 H11 C H sing 1.08 N N
34 C12 C13 C C sing 1.38 N Y
35 C12 H12 C H sing 1.08 N N
36 C13 N14 C N doub 1.32 N Y
37 C13 H13 C H sing 1.08 N N