Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NVP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -0.976 -0.279 -0.372
2 CA C CA N N N 0 -2.014 -1.212 -0.818
3 CB C CB N N N 0 -3.026 -0.703 -1.847
4 CC C CC N N N 0 -1.947 -1.704 -2.265
5 N3 N N3 N Y N 0 -1.878 0.712 1.548
6 C4 C C4 N Y N 0 -1.821 1.12 2.801
7 C5 C C5 N Y N 0 -0.697 0.896 3.569
8 C6 C C6 N Y N 0 0.376 0.213 3.016
9 CD C CD N N N 0 1.62 -0.049 3.825
10 C2 C C2 N Y N 0 -0.872 0.066 0.974
11 C7 C C7 N Y N 0 0.282 -0.218 1.697
12 N8 N N8 N N N 0 1.331 -0.95 1.144
13 C9 C C9 N N N 0 1.806 -0.842 -0.088
14 OE O OE N N N 0 2.752 -1.547 -0.381
15 C10 C C10 N Y N 0 1.29 0.051 -1.128
16 C15 C C15 N Y N 0 -0.088 0.266 -1.283
17 C11 C C11 N Y N 0 2.174 0.678 -2.015
18 C12 C C12 N Y N 0 1.645 1.45 -3.035
19 C13 C C13 N Y N 0 0.273 1.578 -3.15
20 N14 N N14 N Y N 0 -0.541 0.997 -2.29
21 HCA H HCA N N N 0 -2.372 -1.913 -0.064
22 HCB1 H 1HCB N N N 0 -4.049 -1.069 -1.769
23 HCB2 H 2HCB N N N 0 -2.919 0.325 -2.191
24 HCC1 H 1HCC N N N 0 -1.13 -1.334 -2.885
25 HCC2 H 2HCC N N N 0 -2.261 -2.729 -2.463
26 HCD2 H 2HCD N N N 0 2.484 -0.085 3.161
27 HC4 H HC4 N N N 0 -2.666 1.637 3.232
28 HC5 H HC5 N N N 0 -0.653 1.248 4.589
29 HCD1 H 1HCD N N N 0 1.521 -1.003 4.344
30 HCD3 H 3HCD N N N 0 1.755 0.749 4.554
31 HN8 H HN8 N N N 0 1.761 -1.601 1.719
32 H11 H H11 N N N 0 3.242 0.562 -1.906
33 H12 H H12 N N N 0 2.299 1.947 -3.736
34 H13 H H13 N N N 0 -0.138 2.165 -3.957