Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : MTQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.33 N N
2 N1 C10 N C doub 1.32 N N
3 C2 N2 C N sing 1.38 N N
4 C2 N3 C N doub 1.32 N N
5 N3 C4 N C sing 1.34 N N
6 C4 O4 C O doub 1.22 N N
7 C4 C9 C C sing 1.47 N N
8 N5 C6 N C sing 1.3 N N
9 N5 C9 N C doub 1.33 N N
10 C6 C7 C C sing 1.5 N N
11 C6 C1' C C doub 1.46 N N
12 C7 N8 C N sing 1.47 N N
13 C7 O3' C O sing 1.45 N N
14 N8 C10 N C sing 1.38 N N
15 C9 C10 C C sing 1.41 N N
16 C1' S1' C S sing 1.8 N N
17 C1' C2' C C sing 1.39 N N
18 S1' MOM1 S MO sing 2.43 N N
19 C2' S2' C S sing 1.8 N N
20 C2' C3' C C doub 1.4 N N
21 S2' MOM1 S MO sing 2.44 N N
22 C3' O3' C O sing 1.34 N N
23 C3' C4' C C sing 1.51 N N
24 C4' O4' C O sing 1.43 N N
25 O4' P O P sing 1.61 N N
26 P O1P P O doub 1.48 N N
27 P O2P P O sing 1.61 N N
28 P O3P P O sing 1.61 N N
29 MOM1 OM1 MO O doub 1.74 N N
30 N2 H2L N H sing 0.97 N N
31 N2 H2 N H sing 0.97 N N
32 C7 H7 C H sing 1.09 N N
33 N8 H8 N H sing 0.97 N N
34 MOM1 OM2 MO O doub 1.74 N N
35 C4' H4'1 C H sing 1.09 N N
36 C4' H4'2 C H sing 1.09 N N
37 O2P H2P O H sing 0.97 N N
38 O3P H3P O H sing 0.97 N N