Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MTQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -4.902 -2.384 -0.113
2 C2 C C2 N N N 0 -6.086 -1.802 0.044
3 N2 N N2 N N N 0 -7.217 -2.59 -0.017
4 N3 N N3 N N N 0 -6.235 -0.505 0.256
5 C4 C C4 N N N 0 -5.173 0.311 0.319
6 O4 O O4 N N N 0 -5.306 1.509 0.528
7 N5 N N5 N N N 0 -2.732 0.447 0.149
8 C6 C C6 N N N 0 -1.587 -0.05 -0.23
9 C7 C C7 R N N 0 -1.455 -1.447 -0.763
10 N8 N N8 N N N 0 -2.541 -2.276 -0.212
11 C9 C C9 N N N 0 -3.848 -0.285 0.127
12 C10 C C10 N N N 0 -3.782 -1.684 -0.072
13 C1' C C1' N N N 0 -0.405 0.796 -0.156
14 S1' S S1' N N N 0 -0.763 2.493 0.316
15 C2' C C2' N N N 0 0.823 0.19 -0.405
16 S2' S S2' N N N 0 2.417 1.01 -0.593
17 C3' C C3' N N N 0 0.893 -1.205 -0.501
18 O3' O O3' N N N 0 -0.179 -1.98 -0.318
19 C4' C C4' N N N 0 2.216 -1.851 -0.822
20 O4' O O4' N N N 0 2.644 -2.638 0.292
21 P P P N N N 0 4.021 -3.472 0.298
22 O1P O O1P N N N 0 5.149 -2.565 -0.01
23 O2P O O2P N N N 0 4.243 -4.129 1.751
24 O3P O O3P N N N 0 3.949 -4.635 -0.812
25 MOM1 MO MOM1 N N N 0 1.551 3.198 0.042
26 OM1 O OM1 N N N 0 2.242 3.766 1.539
27 OM2 O OM2 N N N 0 1.73 4.369 -1.237
28 H2L H H2L N N Y 0 -7.135 -3.545 -0.171
29 H2 H H2 N N N 0 -8.093 -2.19 0.095
30 H7 H H7 N N N 0 -1.508 -1.438 -1.851
31 H8 H H8 N N N 0 -2.392 -3.2 0.041
32 H4'1 H H4'1 N N N 0 2.105 -2.49 -1.698
33 H4'2 H H4'2 N N N 0 2.957 -1.079 -1.027
34 H2P H H2P N N N 0 5.056 -4.648 1.828
35 H3P H H3P N N N 0 3.231 -5.268 -0.673