Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LYP    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 CA CB C C sing 1.53 N N
3 CB CG C C sing 1.53 N N
4 CG CD C C sing 1.53 N N
5 CD CE C C sing 1.53 N N
6 CE NZ C N sing 1.47 N N
7 NZ CM N C sing 1.47 N N
8 CA C C C sing 1.51 N N
9 C O C O doub 1.21 N N
10 CCA CCC C C sing 1.53 N N
11 NZ CCD N C sing 1.47 N N
12 CCC CCD C C sing 1.53 N N
13 C OXT C O sing 1.34 N N
14 N H N H sing 1.01 N N
15 N H2 N H sing 1.01 N N
16 CA HA C H sing 1.09 N N
17 CB HBC1 C H sing 1.09 N N
18 CB HBC2 C H sing 1.09 N N
19 CG HGC1 C H sing 1.09 N N
20 CG HGC2 C H sing 1.09 N N
21 CD HDC1 C H sing 1.09 N N
22 CD HDC2 C H sing 1.09 N N
23 CE HEC1 C H sing 1.09 N N
24 CE HEC2 C H sing 1.09 N N
25 CM HMC1 C H sing 1.09 N N
26 CM HMC2 C H sing 1.09 N N
27 CM HMC3 C H sing 1.09 N N
28 CCD HCD1 C H sing 1.09 N N
29 CCD HCD2 C H sing 1.09 N N
30 OXT HXT O H sing 0.97 N N
31 CCA HCA1 C H sing 1.09 N N
32 CCA HCA2 C H sing 1.09 N N
33 CCA HCA3 C H sing 1.09 N N
34 CCC HCC1 C H sing 1.09 N N
35 CCC HCC2 C H sing 1.09 N N