Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : LU9    

Bonds between two atoms of the molecule

Total Number of Bonds: 303


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C612 C611 C C sing 1.53 N N
2 C89 C88 C C sing 1.53 N N
3 C611 C610 C C sing 1.53 N N
4 C514 C513 C C sing 1.53 N N
5 C610 C69 C C sing 1.53 N N
6 C88 C87 C C sing 1.53 N N
7 C513 C512 C C sing 1.53 N N
8 C87 C86 C C sing 1.53 N N
9 C69 C68 C C sing 1.53 N N
10 C113 C112 C C sing 1.53 N N
11 C512 C511 C C sing 1.53 N N
12 C314 C313 C C sing 1.53 N N
13 C313 C312 C C sing 1.53 N N
14 C86 C85 C C sing 1.53 N N
15 C68 C67 C C sing 1.53 N N
16 C112 C111 C C sing 1.53 N N
17 C511 C510 C C sing 1.53 N N
18 C85 C84 C C sing 1.53 N N
19 C312 C311 C C sing 1.53 N N
20 C67 C66 C C sing 1.53 N N
21 C510 C59 C C sing 1.53 N N
22 C111 C110 C C sing 1.53 N N
23 C84 C83 C C sing 1.53 N N
24 C311 C310 C C sing 1.53 N N
25 C110 C19 C C sing 1.53 N N
26 C66 C65 C C sing 1.53 N N
27 C59 C58 C C sing 1.53 N N
28 C83 C82 C C sing 1.53 N N
29 C310 C39 C C sing 1.53 N N
30 C58 C57 C C sing 1.53 N N
31 C19 C18 C C sing 1.53 N N
32 C65 C64 C C sing 1.53 N N
33 C39 C38 C C sing 1.53 N N
34 C82 C81 C C sing 1.51 N N
35 C57 C56 C C sing 1.53 N N
36 C18 C17 C C sing 1.53 N N
37 C64 C63 C C sing 1.53 N N
38 C81 O81 C O doub 1.21 N N
39 C81 O73 C O sing 1.34 N N
40 C38 C37 C C sing 1.53 N N
41 C56 C55 C C sing 1.53 N N
42 C37 C36 C C sing 1.53 N N
43 C17 C16 C C sing 1.53 N N
44 C63 C62 C C sing 1.53 N N
45 C36 C35 C C sing 1.53 N N
46 O73 C73 O C sing 1.45 N N
47 C55 C54 C C sing 1.53 N N
48 C16 C15 C C sing 1.53 N N
49 C62 C61 C C sing 1.51 N N
50 C35 C34 C C sing 1.53 N N
51 C54 C53 C C sing 1.53 N N
52 C73 C72 C C sing 1.53 N N
53 C61 O53 C O sing 1.34 N N
54 C61 O61 C O doub 1.21 N N
55 O53 C53 O C sing 1.45 N N
56 C15 C14 C C sing 1.53 N N
57 C34 C33 C C sing 1.53 N N
58 C53 C52 C C sing 1.53 N N
59 C72 C71 C C sing 1.51 N N
60 C33 O33 C O sing 1.43 N N
61 C33 C32 C C sing 1.53 N N
62 C14 C13 C C sing 1.53 N N
63 C52 C51 C C sing 1.51 N N
64 C71 O71 C O doub 1.21 N N
65 C71 OB3 C O sing 1.34 N N
66 C13 O13 C O sing 1.43 N N
67 C13 C12 C C sing 1.53 N N
68 O51 C51 O C doub 1.21 N N
69 C51 NB2 C N sing 1.35 N N
70 C32 C31 C C sing 1.51 N N
71 O01 C11 O C doub 1.21 N N
72 OB3 CB3 O C sing 1.45 N N
73 C12 C11 C C sing 1.51 N N
74 C11 NA2 C N sing 1.35 N N
75 NB2 CB2 N C sing 1.46 N N
76 OPB3 PB O P sing 1.57 N N
77 OA3 C31 O C sing 1.34 N N
78 OA3 CA3 O C sing 1.45 N N
79 C31 O31 C O doub 1.21 N N
80 CB3 CB2 C C sing 1.53 N N
81 CB3 CB4 C C sing 1.53 N N
82 CB2 CB1 C C sing 1.53 N N
83 NA2 CA2 N C sing 1.47 N N
84 OPB4 PB O P sing 1.57 N N
85 CA2 CA3 C C sing 1.53 N N
86 CA2 CA1 C C sing 1.53 N N
87 PB OB4 P O sing 1.61 N N
88 PB OPB2 P O doub 1.57 N N
89 CA3 CA4 C C sing 1.53 N N
90 OB4 CB4 O C sing 1.43 N N
91 CB4 CB5 C C sing 1.53 N N
92 CA4 OA4 C O sing 1.43 N N
93 CA4 CA5 C C sing 1.53 N N
94 CA6 OA6 C O sing 1.43 N N
95 CA6 CA5 C C sing 1.53 N N
96 CB1 OA6 C O sing 1.43 N N
97 CB1 OB5 C O sing 1.43 N N
98 CA1 OA1 C O sing 1.43 N N
99 CA1 OA5 C O sing 1.43 N N
100 CA5 OA5 C O sing 1.43 N N
101 CB5 OB5 C O sing 1.43 N N
102 CB5 CB6 C C sing 1.53 N N
103 OA1 PA O P sing 1.61 N N
104 CB6 OB6 C O sing 1.43 N N
105 PA OPA2 P O doub 1.57 N N
106 PA OPA3 P O sing 1.57 N N
107 PA OPA4 P O sing 1.57 N N
108 OB6 C02 O C sing 1.43 N N
109 O08 C08 O C sing 1.43 N N
110 C08 C07 C C sing 1.53 N N
111 O02 C01 O C sing 1.34 N N
112 C01 C02 C C sing 1.51 N N
113 C01 O03 C O doub 1.21 N N
114 C02 O04 C O sing 1.43 N N
115 C02 C04 C C sing 1.53 N N
116 O8 C8 O C sing 1.43 N N
117 O04 C03 O C sing 1.43 N N
118 O11 C1 O C doub 1.21 N N
119 C03 C07 C C sing 1.53 N N
120 C03 C06 C C sing 1.53 N N
121 O07 C07 O C sing 1.43 N N
122 C8 C7 C C sing 1.53 N N
123 C04 C05 C C sing 1.53 N N
124 C05 C06 C C sing 1.53 N N
125 C05 O05 C O sing 1.43 N N
126 C1 O12 C O sing 1.34 N N
127 C1 C2 C C sing 1.51 N N
128 C06 O06 C O sing 1.43 N N
129 O6 C2 O C sing 1.43 N N
130 O6 C6 O C sing 1.43 N N
131 C7 C6 C C sing 1.53 N N
132 C7 O7 C O sing 1.43 N N
133 C2 O05 C O sing 1.43 N N
134 C2 C3 C C sing 1.53 N N
135 C6 C5 C C sing 1.53 N N
136 C3 C4 C C sing 1.53 N N
137 O5 C5 O C sing 1.43 N N
138 C5 C4 C C sing 1.53 N N
139 C4 O4 C O sing 1.43 N N
140 C12 H1 C H sing 1.09 N N
141 C12 H2 C H sing 1.09 N N
142 O12 H3 O H sing 0.97 N N
143 O13 H4 O H sing 0.97 N N
144 C3 H5 C H sing 1.09 N N
145 C3 H6 C H sing 1.09 N N
146 C32 H7 C H sing 1.09 N N
147 C32 H8 C H sing 1.09 N N
148 C33 H9 C H sing 1.09 N N
149 C34 H10 C H sing 1.09 N N
150 C34 H11 C H sing 1.09 N N
151 C35 H12 C H sing 1.09 N N
152 C35 H13 C H sing 1.09 N N
153 C36 H14 C H sing 1.09 N N
154 C36 H15 C H sing 1.09 N N
155 C37 H16 C H sing 1.09 N N
156 C37 H17 C H sing 1.09 N N
157 C38 H18 C H sing 1.09 N N
158 C38 H19 C H sing 1.09 N N
159 C39 H20 C H sing 1.09 N N
160 C39 H21 C H sing 1.09 N N
161 CB1 H22 C H sing 1.09 N N
162 CB2 H23 C H sing 1.09 N N
163 NB2 H24 N H sing 0.97 N N
164 CB3 H25 C H sing 1.09 N N
165 C03 H26 C H sing 1.09 N N
166 C04 H27 C H sing 1.09 N N
167 C04 H28 C H sing 1.09 N N
168 C05 H29 C H sing 1.09 N N
169 C06 H30 C H sing 1.09 N N
170 C07 H31 C H sing 1.09 N N
171 C08 H32 C H sing 1.09 N N
172 C08 H33 C H sing 1.09 N N
173 C13 H34 C H sing 1.09 N N
174 C14 H35 C H sing 1.09 N N
175 C14 H36 C H sing 1.09 N N
176 C15 H37 C H sing 1.09 N N
177 C15 H38 C H sing 1.09 N N
178 C16 H39 C H sing 1.09 N N
179 C16 H40 C H sing 1.09 N N
180 C17 H41 C H sing 1.09 N N
181 C17 H42 C H sing 1.09 N N
182 C18 H43 C H sing 1.09 N N
183 C18 H44 C H sing 1.09 N N
184 C19 H45 C H sing 1.09 N N
185 C19 H46 C H sing 1.09 N N
186 C4 H47 C H sing 1.09 N N
187 C5 H48 C H sing 1.09 N N
188 C52 H49 C H sing 1.09 N N
189 C52 H50 C H sing 1.09 N N
190 C53 H51 C H sing 1.09 N N
191 C54 H52 C H sing 1.09 N N
192 C54 H53 C H sing 1.09 N N
193 C55 H54 C H sing 1.09 N N
194 C55 H55 C H sing 1.09 N N
195 C56 H56 C H sing 1.09 N N
196 C56 H57 C H sing 1.09 N N
197 C57 H58 C H sing 1.09 N N
198 C57 H59 C H sing 1.09 N N
199 C58 H60 C H sing 1.09 N N
200 C58 H61 C H sing 1.09 N N
201 C59 H62 C H sing 1.09 N N
202 C59 H63 C H sing 1.09 N N
203 C6 H64 C H sing 1.09 N N
204 C62 H65 C H sing 1.09 N N
205 C62 H66 C H sing 1.09 N N
206 C63 H67 C H sing 1.09 N N
207 C63 H68 C H sing 1.09 N N
208 C64 H69 C H sing 1.09 N N
209 C64 H70 C H sing 1.09 N N
210 C65 H71 C H sing 1.09 N N
211 C65 H72 C H sing 1.09 N N
212 C66 H73 C H sing 1.09 N N
213 C66 H74 C H sing 1.09 N N
214 C67 H75 C H sing 1.09 N N
215 C67 H76 C H sing 1.09 N N
216 C68 H77 C H sing 1.09 N N
217 C68 H78 C H sing 1.09 N N
218 C69 H79 C H sing 1.09 N N
219 C69 H80 C H sing 1.09 N N
220 C7 H81 C H sing 1.09 N N
221 C72 H83 C H sing 1.09 N N
222 C72 H84 C H sing 1.09 N N
223 C73 H85 C H sing 1.09 N N
224 C73 H86 C H sing 1.09 N N
225 C8 H87 C H sing 1.09 N N
226 C8 H88 C H sing 1.09 N N
227 C82 H90 C H sing 1.09 N N
228 C82 H91 C H sing 1.09 N N
229 C83 H92 C H sing 1.09 N N
230 C83 H93 C H sing 1.09 N N
231 C84 H94 C H sing 1.09 N N
232 C84 H95 C H sing 1.09 N N
233 C85 H96 C H sing 1.09 N N
234 C85 H97 C H sing 1.09 N N
235 C86 H98 C H sing 1.09 N N
236 C86 H99 C H sing 1.09 N N
237 C87 H100 C H sing 1.09 N N
238 C87 H101 C H sing 1.09 N N
239 C88 H102 C H sing 1.09 N N
240 C88 H103 C H sing 1.09 N N
241 C89 H104 C H sing 1.09 N N
242 C89 H105 C H sing 1.09 N N
243 C89 H106 C H sing 1.09 N N
244 CA1 H107 C H sing 1.09 N N
245 CA2 H108 C H sing 1.09 N N
246 CA3 H109 C H sing 1.09 N N
247 CA4 H110 C H sing 1.09 N N
248 CA5 H111 C H sing 1.09 N N
249 CA6 H112 C H sing 1.09 N N
250 CA6 H113 C H sing 1.09 N N
251 CB4 H114 C H sing 1.09 N N
252 CB5 H115 C H sing 1.09 N N
253 CB6 H116 C H sing 1.09 N N
254 CB6 H117 C H sing 1.09 N N
255 NA2 H118 N H sing 0.97 N N
256 O02 H119 O H sing 0.97 N N
257 O06 H121 O H sing 0.97 N N
258 O07 H122 O H sing 0.97 N N
259 O08 H123 O H sing 0.97 N N
260 O33 H124 O H sing 0.97 N N
261 O4 H125 O H sing 0.97 N N
262 O5 H126 O H sing 0.97 N N
263 O7 H127 O H sing 0.97 N N
264 OA4 H82 O H sing 0.97 N N
265 O8 H89 O H sing 0.97 N N
266 C610 H161 C H sing 1.09 N N
267 C610 H160 C H sing 1.09 N N
268 C611 H163 C H sing 1.09 N N
269 C611 H162 C H sing 1.09 N N
270 C612 H164 C H sing 1.09 N N
271 C612 H166 C H sing 1.09 N N
272 C612 H165 C H sing 1.09 N N
273 C510 H149 C H sing 1.09 N N
274 C511 H151 C H sing 1.09 N N
275 C511 H152 C H sing 1.09 N N
276 C510 H150 C H sing 1.09 N N
277 C512 H154 C H sing 1.09 N N
278 C512 H153 C H sing 1.09 N N
279 C513 H155 C H sing 1.09 N N
280 C513 H156 C H sing 1.09 N N
281 C514 H157 C H sing 1.09 N N
282 C514 H158 C H sing 1.09 N N
283 C514 H159 C H sing 1.09 N N
284 C110 H140 C H sing 1.09 N N
285 C110 H141 C H sing 1.09 N N
286 C111 H142 C H sing 1.09 N N
287 C111 H143 C H sing 1.09 N N
288 C112 H144 C H sing 1.09 N N
289 C112 H145 C H sing 1.09 N N
290 C113 H146 C H sing 1.09 N N
291 C113 H147 C H sing 1.09 N N
292 C113 H148 C H sing 1.09 N N
293 C310 H130 C H sing 1.09 N N
294 C310 H129 C H sing 1.09 N N
295 C311 H131 C H sing 1.09 N N
296 C311 H132 C H sing 1.09 N N
297 C312 H134 C H sing 1.09 N N
298 C312 H133 C H sing 1.09 N N
299 C313 H136 C H sing 1.09 N N
300 C313 H135 C H sing 1.09 N N
301 C314 H138 C H sing 1.09 N N
302 C314 H139 C H sing 1.09 N N
303 C314 H137 C H sing 1.09 N N