Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LMT    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1B C2B C C sing 1.53 N N
2 C1B O1B C O sing 1.43 N N
3 C1B O5B C O sing 1.43 N N
4 C1B H1B C H sing 1.09 N N
5 C2B C3B C C sing 1.53 N N
6 C2B O2B C O sing 1.43 N N
7 C2B H2B C H sing 1.09 N N
8 C3B C4B C C sing 1.53 N N
9 C3B O3B C O sing 1.43 N N
10 C3B H3B C H sing 1.09 N N
11 C4B C5B C C sing 1.53 N N
12 C4B O4' C O sing 1.43 N N
13 C4B H4B C H sing 1.09 N N
14 C5B C6B C C sing 1.53 N N
15 C5B O5B C O sing 1.43 N N
16 C5B H5B C H sing 1.09 N N
17 C6B O6B C O sing 1.43 N N
18 C6B H6'2 C H sing 1.09 N N
19 C6B H6'1 C H sing 1.09 N N
20 O1B C4' O C sing 1.43 N N
21 O2B H2O1 O H sing 0.97 N N
22 O3B H3O1 O H sing 0.97 N N
23 O4' H4O1 O H sing 0.97 N N
24 O6B H6B O H sing 0.97 N N
25 C1' C2' C C sing 1.53 N N
26 C1' O1' C O sing 1.43 N N
27 C1' O5' C O sing 1.43 N N
28 C1' H1' C H sing 1.09 N N
29 C2' C3' C C sing 1.53 N N
30 C2' O2' C O sing 1.43 N N
31 C2' H2' C H sing 1.09 N N
32 C3' C4' C C sing 1.53 N N
33 C3' O3' C O sing 1.43 N N
34 C3' H3' C H sing 1.09 N N
35 C4' C5' C C sing 1.53 N N
36 C4' H4' C H sing 1.09 N N
37 C5' C6' C C sing 1.53 N N
38 C5' O5' C O sing 1.43 N N
39 C5' H5' C H sing 1.09 N N
40 C6' O6' C O sing 1.43 N N
41 C6' H6D C H sing 1.09 N N
42 C6' H6E C H sing 1.09 N N
43 O1' C1 O C sing 1.43 N N
44 O2' H2O2 O H sing 0.97 N N
45 O3' H3O2 O H sing 0.97 N N
46 O6' H6' O H sing 0.97 N N
47 C1 C2 C C sing 1.53 N N
48 C1 H12 C H sing 1.09 N N
49 C1 H11 C H sing 1.09 N N
50 C2 C3 C C sing 1.53 N N
51 C2 H22 C H sing 1.09 N N
52 C2 H21 C H sing 1.09 N N
53 C3 C4 C C sing 1.53 N N
54 C3 H32 C H sing 1.09 N N
55 C3 H31 C H sing 1.09 N N
56 C4 C5 C C sing 1.53 N N
57 C4 H42 C H sing 1.09 N N
58 C4 H41 C H sing 1.09 N N
59 C5 C6 C C sing 1.53 N N
60 C5 H52 C H sing 1.09 N N
61 C5 H51 C H sing 1.09 N N
62 C6 C7 C C sing 1.53 N N
63 C6 H62 C H sing 1.09 N N
64 C6 H61 C H sing 1.09 N N
65 C7 C8 C C sing 1.53 N N
66 C7 H72 C H sing 1.09 N N
67 C7 H71 C H sing 1.09 N N
68 C8 C9 C C sing 1.53 N N
69 C8 H82 C H sing 1.09 N N
70 C8 H81 C H sing 1.09 N N
71 C9 C10 C C sing 1.53 N N
72 C9 H92 C H sing 1.09 N N
73 C9 H91 C H sing 1.09 N N
74 C10 C11 C C sing 1.53 N N
75 C10 H102 C H sing 1.09 N N
76 C10 H101 C H sing 1.09 N N
77 C11 C12 C C sing 1.53 N N
78 C11 H112 C H sing 1.09 N N
79 C11 H111 C H sing 1.09 N N
80 C12 H123 C H sing 1.09 N N
81 C12 H122 C H sing 1.09 N N
82 C12 H121 C H sing 1.09 N N