Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LIJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 98


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C5 C C sing 1.53 N N
2 C4 H41 C H sing 1.09 N N
3 C4 H42 C H sing 1.09 N N
4 C4 H43 C H sing 1.09 N N
5 C5 C6 C C sing 1.53 N N
6 C5 H51 C H sing 1.09 N N
7 C5 H52 C H sing 1.09 N N
8 C6 C7 C C sing 1.53 N N
9 C6 H61 C H sing 1.09 N N
10 C6 H62 C H sing 1.09 N N
11 C7 C3 C C sing 1.53 N N
12 C7 S8 C S sing 1.81 N N
13 C7 H7 C H sing 1.09 N N
14 C10 C9 C C sing 1.53 N N
15 C10 C11 C C sing 1.51 N N
16 C10 N40 C N sing 1.46 N N
17 C10 H10 C H sing 1.09 N N
18 N12 C13 N C sing 1.46 N N
19 N12 C11 N C sing 1.35 N N
20 N12 HN12 N H sing 0.97 N N
21 C13 C21 C C sing 1.53 N N
22 C13 C14 C C sing 1.53 N N
23 C13 H13 C H sing 1.09 N N
24 C15 C20 C C doub 1.38 N Y
25 C15 C14 C C sing 1.51 N N
26 C15 C16 C C sing 1.38 N Y
27 C17 C16 C C doub 1.38 N Y
28 C17 C18 C C sing 1.38 N Y
29 C17 H17 C H sing 1.08 N N
30 C20 C19 C C sing 1.38 N Y
31 C20 H20 C H sing 1.08 N N
32 C21 C22 C C sing 1.53 N N
33 C21 O21 C O sing 1.43 N N
34 C21 H21 C H sing 1.09 N N
35 C22 N23 C N sing 1.47 N N
36 C22 H221 C H sing 1.09 N N
37 C22 H222 C H sing 1.09 N N
38 C24 N23 C N sing 1.47 N N
39 C24 C25 C C sing 1.51 N N
40 C24 H241 C H sing 1.09 N N
41 C24 H242 C H sing 1.09 N N
42 C26 C25 C C sing 1.38 N Y
43 C26 C27 C C doub 1.39 N Y
44 C26 H26 C H sing 1.08 N N
45 C28 C27 C C sing 1.39 N Y
46 C28 C29 C C doub 1.38 N Y
47 C28 H28 C H sing 1.08 N N
48 C1 C2 C C sing 1.53 N N
49 C1 H11 C H sing 1.09 N N
50 C1 H12 C H sing 1.09 N N
51 C1 H13A C H sing 1.09 N N
52 C2 C3 C C sing 1.53 N N
53 C2 H21A C H sing 1.09 N N
54 C2 H22 C H sing 1.09 N N
55 C3 H31 C H sing 1.09 N N
56 C3 H32 C H sing 1.09 N N
57 S8 O8B S O doub 1.42 N N
58 S8 O8A S O doub 1.42 N N
59 S8 C9 S C sing 1.81 N N
60 C9 H91 C H sing 1.09 N N
61 C9 H92 C H sing 1.09 N N
62 C11 O11 C O doub 1.21 N N
63 C14 H141 C H sing 1.09 N N
64 C14 H142 C H sing 1.09 N N
65 C16 H16 C H sing 1.08 N N
66 C18 C19 C C doub 1.38 N Y
67 C18 H18 C H sing 1.08 N N
68 C19 H19 C H sing 1.08 N N
69 O21 HO21 O H sing 0.97 N N
70 N23 HN23 N H sing 1.01 N N
71 C25 C30 C C doub 1.38 N Y
72 C27 O27 C O sing 1.36 N N
73 O27 C31 O C sing 1.43 N N
74 C29 C30 C C sing 1.38 N Y
75 C29 H29 C H sing 1.08 N N
76 C30 H30 C H sing 1.08 N N
77 C31 H311 C H sing 1.09 N N
78 C31 H312 C H sing 1.09 N N
79 C31 H313 C H sing 1.09 N N
80 N40 C41 N C sing 1.35 N N
81 N40 HN40 N H sing 0.97 N N
82 C41 O42 C O doub 1.21 N N
83 C41 O43 C O sing 1.35 N N
84 O43 C44 O C sing 1.45 N N
85 C44 C45 C C sing 1.51 N N
86 C44 H441 C H sing 1.09 N N
87 C44 H442 C H sing 1.09 N N
88 C45 C46 C C sing 1.38 N Y
89 C45 C50 C C doub 1.38 N Y
90 C46 C47 C C doub 1.38 N Y
91 C46 H46 C H sing 1.08 N N
92 C47 C48 C C sing 1.38 N Y
93 C47 H47 C H sing 1.08 N N
94 C48 C49 C C doub 1.38 N Y
95 C48 H48 C H sing 1.08 N N
96 C49 C50 C C sing 1.38 N Y
97 C49 H49 C H sing 1.08 N N
98 C50 H50 C H sing 1.08 N N