Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JO9    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C8 C9 C C sing 1.55 N N
2 C8 N1 C N sing 1.45 N N
3 O2 C7 O C doub 1.21 N N
4 C10 C9 C C sing 1.47 N N
5 C10 C11 C C sing 1.53 N N
6 N2 C14 N C sing 1.35 N N
7 N2 C6 N C sing 1.46 N N
8 C11 C12 C C sing 1.51 N N
9 C7 N1 C N sing 1.35 N N
10 C7 C6 C C sing 1.51 N N
11 N1 C13 N C sing 1.48 N N
12 C14 O3 C O doub 1.21 N N
13 C6 C5 C C sing 1.53 N N
14 C5 N C N sing 1.49 N N
15 C5 S C S sing 1.85 N N
16 C12 C13 C C sing 1.54 N N
17 N C3 N C sing 1.47 N N
18 S C1 S C sing 1.84 N N
19 O1 C4 O C doub 1.21 N N
20 C3 C1 C C sing 1.54 N N
21 C3 C4 C C sing 1.51 N N
22 C1 C C C sing 1.53 N N
23 C1 C2 C C sing 1.53 N N
24 C4 O C O sing 1.34 N N
25 C8 H12 C H sing 1.09 N N
26 C8 H11 C H sing 1.09 N N
27 C9 H14 C H sing 1.09 N N
28 C9 H13 C H sing 1.09 N N
29 C10 H16 C H sing 1.09 N N
30 C10 H15 C H sing 1.09 N N
31 C11 H18 C H sing 1.09 N N
32 C11 H17 C H sing 1.09 N N
33 C12 H19 C H sing 1.09 N N
34 C12 H20 C H sing 1.09 N N
35 C2 H4 C H sing 1.09 N N
36 C2 H5 C H sing 1.09 N N
37 C2 H6 C H sing 1.09 N N
38 C3 H7 C H sing 1.09 N N
39 C5 H10 C H sing 1.09 N N
40 C6 H C H sing 1.09 N N
41 N H25 N H sing 1.01 N N
42 C H2 C H sing 1.09 N N
43 C H1 C H sing 1.09 N N
44 C H3 C H sing 1.09 N N
45 O H8 O H sing 0.97 N N
46 C13 H21 C H sing 1.09 N N
47 C13 H22 C H sing 1.09 N N
48 C14 H24 C H sing 1.08 N N
49 N2 H23 N H sing 0.97 N N