Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : J2Z    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O2 C8 O C sing 1.43 N N
2 C8 C9 C C sing 1.55 N N
3 C8 C7 C C sing 1.52 N N
4 O1 C7 O C doub 1.21 N N
5 C9 C10 C C sing 1.53 N N
6 C7 C5 C C sing 1.5 N N
7 C6 C5 C C sing 1.53 N N
8 C10 C5 C C sing 1.56 N N
9 C10 C12 C C sing 1.52 N N
10 C5 C4 C C sing 1.51 N N
11 C14 C12 C C sing 1.53 N N
12 C14 C15 C C sing 1.53 N N
13 C12 C2 C C sing 1.53 N N
14 C4 C3 C C sing 1.54 N N
15 C15 C16 C C sing 1.51 N N
16 C2 C3 C C sing 1.52 N N
17 C2 C21 C C sing 1.5 N N
18 C16 C21 C C doub 1.38 N Y
19 C16 C17 C C sing 1.39 N Y
20 C21 C20 C C sing 1.39 N Y
21 C17 C18 C C doub 1.38 N Y
22 C20 C19 C C doub 1.38 N Y
23 C18 C19 C C sing 1.39 N Y
24 C18 O3 C O sing 1.36 N N
25 C8 H8 C H sing 1.09 N N
26 O2 HO2 O H sing 0.97 N N
27 C9 H19 C H sing 1.09 N N
28 C9 H29 C H sing 1.09 N N
29 C10 H10 C H sing 1.09 N N
30 C6 H16 C H sing 1.09 N N
31 C6 H26 C H sing 1.09 N N
32 C6 H36 C H sing 1.09 N N
33 C12 H12 C H sing 1.09 N N
34 C2 H2 C H sing 1.09 N N
35 C3 H13 C H sing 1.09 N N
36 C3 H23 C H sing 1.09 N N
37 C4 H14 C H sing 1.09 N N
38 C4 H24 C H sing 1.09 N N
39 C14 H114 C H sing 1.09 N N
40 C14 H214 C H sing 1.09 N N
41 C15 H115 C H sing 1.09 N N
42 C15 H215 C H sing 1.09 N N
43 C17 H17 C H sing 1.08 N N
44 O3 HO3 O H sing 0.97 N N
45 C19 H19A C H sing 1.08 N N
46 C20 H20 C H sing 1.08 N N