Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : J2Z

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -4.492 -1.571 0.034
2 C7 C C7 N N N 0 -3.712 -0.659 0.171
3 C8 C C8 R N N 0 -4.043 0.827 0.256
4 O2 O O2 N N N 0 -4.768 1.235 -0.905
5 C9 C C9 N N N 0 -2.686 1.58 0.328
6 C10 C C10 S N N 0 -1.717 0.581 -0.315
7 C5 C C5 S N N 0 -2.222 -0.758 0.3
8 C6 C C6 N N N 0 -1.844 -0.811 1.781
9 C12 C C12 R N N 0 -0.263 0.714 0.093
10 C2 C C2 S N N 0 0.499 -0.426 -0.595
11 C3 C C3 N N N 0 -0.027 -1.787 -0.163
12 C4 C C4 N N N 0 -1.538 -1.898 -0.423
13 C14 C C14 N N N 0 0.34 2.036 -0.382
14 C15 C C15 N N N 0 1.737 2.169 0.224
15 C16 C C16 N Y N 0 2.541 0.911 0.023
16 C21 C C21 N Y N 0 1.973 -0.29 -0.347
17 C17 C C17 N Y N 0 3.913 0.986 0.225
18 C18 C C18 N Y N 0 4.71 -0.134 0.065
19 O3 O O3 N N N 0 6.052 -0.05 0.264
20 C19 C C19 N Y N 0 4.134 -1.342 -0.299
21 C20 C C20 N Y N 0 2.773 -1.414 -0.502
22 H8 H H8 N N N 0 -4.629 1.029 1.153
23 HO2 H HO2 N N N 0 -5.626 0.799 -1.007
24 H19 H H19 N N N 0 -2.726 2.505 -0.247
25 H29 H H29 N N N 0 -2.408 1.779 1.363
26 H10 H H10 N N N 0 -1.823 0.581 -1.4
27 H16 H H16 N N N 0 -2.287 -1.697 2.237
28 H26 H H26 N N N 0 -0.759 -0.857 1.878
29 H36 H H36 N N N 0 -2.216 0.081 2.284
30 H12 H H12 N N N 0 -0.171 0.623 1.175
31 H2 H H2 N N N 0 0.343 -0.332 -1.669
32 H13 H H13 N N N 0 0.494 -2.567 -0.719
33 H23 H H23 N N N 0 0.155 -1.922 0.903
34 H14 H H14 N N N 0 -1.916 -2.851 -0.051
35 H24 H H24 N N N 0 -1.722 -1.82 -1.495
36 H114 H H114 N N N 0 0.41 2.039 -1.47
37 H214 H H214 N N N 0 -0.285 2.865 -0.051
38 H115 H H115 N N N 0 2.254 3.003 -0.25
39 H215 H H215 N N N 0 1.645 2.367 1.292
40 H17 H H17 N N N 0 4.362 1.926 0.51
41 HO3 H HO3 N N N 0 6.327 -0.229 1.174
42 H19A H H19A N N N 0 4.748 -2.222 -0.422
43 H20 H H20 N N N 0 2.324 -2.354 -0.786