Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IZB    

Bonds between two atoms of the molecule

Total Number of Bonds: 72


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.55 N N
2 C1 S5 C S sing 1.84 N N
3 C1 C11 C C sing 1.51 N N
4 C1 H1 C H sing 1.09 N N
5 C2 C3 C C sing 1.5 N N
6 C2 H2C1 C H sing 1.09 N N
7 C2 H2C2 C H sing 1.09 N N
8 C3 N4 C N sing 1.34 N N
9 C3 O9 C O doub 1.21 N N
10 N4 S5 N S sing 1.68 N N
11 N4 H4 N H sing 0.97 N N
12 S5 O6 S O doub 1.42 N N
13 S5 O7 S O doub 1.42 N N
14 C11 C12 C C doub 1.38 N Y
15 C11 C16 C C sing 1.38 N Y
16 C12 C13 C C sing 1.38 N Y
17 C12 H12 C H sing 1.08 N N
18 C13 C14 C C doub 1.38 N Y
19 C13 H13 C H sing 1.08 N N
20 C14 C15 C C sing 1.38 N Y
21 C14 C21 C C sing 1.51 N N
22 C15 C16 C C doub 1.38 N Y
23 C15 H15 C H sing 1.08 N N
24 C16 H16 C H sing 1.08 N N
25 C21 C22 C C sing 1.53 N N
26 C21 H211 C H sing 1.09 N N
27 C21 H212 C H sing 1.09 N N
28 C22 N45 C N sing 1.47 N N
29 C22 C25 C C sing 1.51 N N
30 C22 H22 C H sing 1.09 N N
31 N45 S1 N S sing 1.66 N N
32 N45 H45 N H sing 0.97 N N
33 S1 O1 S O doub 1.42 N N
34 S1 O2 S O doub 1.42 N N
35 S1 C8 S C sing 1.76 N N
36 C17 C19 C C doub 1.38 N Y
37 C17 C6 C C sing 1.39 N Y
38 C17 H17 C H sing 1.08 N N
39 C19 C23 C C sing 1.39 N Y
40 C19 H19 C H sing 1.08 N N
41 C23 C4 C C doub 1.41 N Y
42 C23 N11 C N sing 1.38 N Y
43 C4 C5 C C sing 1.4 N Y
44 C4 N13 C N sing 1.36 N Y
45 C5 C6 C C doub 1.37 N Y
46 C5 H5 C H sing 1.08 N N
47 C6 H6 C H sing 1.08 N N
48 N11 C25 N C sing 1.36 N Y
49 N11 H11 N H sing 0.97 N N
50 C25 N13 C N doub 1.3 N Y
51 C18 O3 C O sing 1.42 N N
52 C18 C27 C C sing 1.53 N N
53 C18 H181 C H sing 1.09 N N
54 C18 H182 C H sing 1.09 N N
55 O3 C24 O C sing 1.36 N N
56 C24 C26 C C doub 1.39 N Y
57 C24 C7 C C sing 1.39 N Y
58 C26 N5 C N sing 1.4 N N
59 C26 C10 C C sing 1.39 N Y
60 N5 C27 N C sing 1.46 N N
61 N5 C20 N C sing 1.47 N N
62 C27 H271 C H sing 1.09 N N
63 C27 H272 C H sing 1.09 N N
64 C7 C8 C C doub 1.38 N Y
65 C7 H7 C H sing 1.08 N N
66 C8 C9 C C sing 1.38 N Y
67 C9 C10 C C doub 1.38 N Y
68 C9 H9 C H sing 1.08 N N
69 C10 H10 C H sing 1.08 N N
70 C20 H201 C H sing 1.09 N N
71 C20 H202 C H sing 1.09 N N
72 C20 H203 C H sing 1.09 N N