Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IXK    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N7 C1 N C sing 1.38 N N
2 C1 N2 C N doub 1.33 N Y
3 C1 C6 C C sing 1.4 N Y
4 N2 C3 N C sing 1.32 N Y
5 N10 C6 N C sing 1.35 N Y
6 N10 C9 N C doub 1.3 N Y
7 C6 C5 C C doub 1.4 N Y
8 C3 N4 C N doub 1.32 N Y
9 C9 N8 C N sing 1.37 N Y
10 C5 N4 C N sing 1.33 N Y
11 C5 N8 C N sing 1.37 N Y
12 N8 C11 N C sing 1.4 N N
13 O12 C11 O C sing 1.34 N Y
14 O12 C13 O C sing 1.35 N Y
15 C11 C15 C C doub 1.35 N Y
16 C16 C13 C C sing 1.51 N N
17 C16 O17 C O sing 1.43 N N
18 C13 C14 C C doub 1.35 N Y
19 N36 C37 N C doub 1.32 N Y
20 N36 C35 N C sing 1.33 N Y
21 C15 C14 C C sing 1.42 N Y
22 C37 N38 C N sing 1.32 N Y
23 C14 O18 C O sing 1.36 N N
24 N39 C35 N C sing 1.38 N N
25 C35 C33 C C doub 1.4 N Y
26 O18 P19 O P sing 1.61 N N
27 N38 C34 N C doub 1.33 N Y
28 C33 C34 C C sing 1.41 N Y
29 C33 N32 C N sing 1.35 N Y
30 O20 P19 O P doub 1.48 N N
31 C34 N30 C N sing 1.37 N Y
32 O21 P19 O P sing 1.61 N N
33 P19 O22 P O sing 1.61 N N
34 N32 C31 N C doub 1.3 N Y
35 N30 C31 N C sing 1.37 N Y
36 N30 C26 N C sing 1.4 N N
37 O25 C26 O C sing 1.34 N Y
38 O25 C24 O C sing 1.35 N Y
39 O22 C23 O C sing 1.43 N N
40 C26 C27 C C doub 1.35 N Y
41 C23 C24 C C sing 1.51 N N
42 C24 C28 C C doub 1.35 N Y
43 C27 C28 C C sing 1.42 N Y
44 C28 O29 C O sing 1.36 N N
45 C15 H1 C H sing 1.08 N N
46 C3 H2 C H sing 1.08 N N
47 C9 H3 C H sing 1.08 N N
48 C16 H4 C H sing 1.09 N N
49 C16 H5 C H sing 1.09 N N
50 C23 H6 C H sing 1.09 N N
51 C23 H7 C H sing 1.09 N N
52 C27 H8 C H sing 1.08 N N
53 C31 H9 C H sing 1.08 N N
54 C37 H10 C H sing 1.08 N N
55 N7 H11 N H sing 0.97 N N
56 N7 H12 N H sing 0.97 N N
57 N39 H13 N H sing 0.97 N N
58 N39 H14 N H sing 0.97 N N
59 O17 H15 O H sing 0.97 N N
60 O21 H16 O H sing 0.97 N N
61 O29 H17 O H sing 0.97 N N