Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IN5    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 N1 C N doub 1.32 N Y
2 C1 C5 C C sing 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C2 C3 C C doub 1.39 N Y
5 C2 N1 C N sing 1.32 N Y
6 C2 C6 C C sing 1.51 N N
7 C3 C4 C C sing 1.39 N Y
8 C3 O1 C O sing 1.36 N N
9 O4 P1 O P doub 1.48 N N
10 O5 P1 O P sing 1.61 N N
11 O5 HO5 O H sing 0.97 N N
12 C7 C5 C C sing 1.51 N N
13 C7 O2 C O sing 1.43 N N
14 C7 H71 C H sing 1.09 N N
15 C7 H72 C H sing 1.09 N N
16 C8 C4 C C sing 1.51 N N
17 C8 N2 C N sing 1.47 N N
18 C8 H81 C H sing 1.09 N N
19 C8 H82 C H sing 1.09 N N
20 C9 C10 C C sing 1.53 N N
21 C9 N2 C N sing 1.47 N N
22 C9 P2 C P sing 1.82 N N
23 C9 H9 C H sing 1.09 N N
24 C10 H101 C H sing 1.09 N N
25 C10 H102 C H sing 1.09 N N
26 C10 H103 C H sing 1.09 N N
27 C4 C5 C C doub 1.38 N Y
28 O1 HO1 O H sing 0.97 N N
29 C6 H61 C H sing 1.09 N N
30 C6 H62 C H sing 1.09 N N
31 C6 H63 C H sing 1.09 N N
32 O2 P1 O P sing 1.61 N N
33 N2 HN2 N H sing 1.01 N N
34 P1 O3 P O sing 1.61 N N
35 O3 HO3 O H sing 0.97 N N
36 P2 O6 P O doub 1.48 N N
37 P2 O7 P O sing 1.61 N N
38 P2 O8 P O sing 1.61 N N
39 O7 HO7 O H sing 0.97 N N
40 O8 HO8 O H sing 0.97 N N