Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HRD    

Bonds between two atoms of the molecule

Total Number of Bonds: 32


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C3 N C sing 1.36 N Y
2 N3 C6 N C sing 1.39 N Y
3 C4 N1 C N doub 1.31 N Y
4 C4 N3 C N sing 1.36 N Y
5 C5 N2 C N sing 1.47 N N
6 C5 H5 C H sing 1.09 N N
7 C5 H5A C H sing 1.09 N N
8 C5 H9 C H sing 1.09 N N
9 C6 C7 C C sing 1.38 N Y
10 C7 C8 C C doub 1.39 N Y
11 C7 H7 C H sing 1.08 N N
12 C8 C9 C C sing 1.47 N N
13 C10 N4 C N sing 1.37 N N
14 C10 N5 C N sing 1.37 N N
15 C1 C8 C C sing 1.42 N Y
16 C1 N6 C N sing 1.36 N N
17 C2 C1 C C doub 1.39 N Y
18 C2 H2 C H sing 1.08 N N
19 C3 C6 C C doub 1.41 N Y
20 C3 C2 C C sing 1.39 N Y
21 N2 C4 N C sing 1.38 N N
22 N2 H10 N H sing 0.97 N N
23 C9 O1 C O doub 1.22 N N
24 C9 N4 C N sing 1.35 N N
25 N4 H13 N H sing 0.97 N N
26 N5 H111 N H sing 0.97 N N
27 C11 N5 C N sing 1.47 N N
28 C11 H11 C H sing 1.09 N N
29 C11 H11A C H sing 1.09 N N
30 C11 H12 C H sing 1.09 N N
31 N6 C10 N C doub 1.31 N N
32 N3 H121 N H sing 0.97 N N