Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : HNV    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O6 C6 O C sing 1.43 N N
2 C6 C5 C C sing 1.53 N N
3 C5 O5 C O sing 1.43 N N
4 C5 C4 C C sing 1.53 N N
5 O5 C1 O C sing 1.43 N N
6 C4 O4 C O sing 1.43 N N
7 C4 C3 C C sing 1.53 N N
8 C3 O3 C O sing 1.43 N N
9 C3 C2 C C sing 1.53 N N
10 C2 O2 C O sing 1.43 N N
11 C2 C1 C C sing 1.53 N N
12 C1 O1 C O sing 1.43 N N
13 O1 C7 O C sing 1.43 N N
14 C7 C8 C C sing 1.47 N N
15 C8 C9 C C trip 1.17 N N
16 C9 C10 C C sing 1.43 N N
17 C10 C15 C C sing 1.4 N Y
18 C10 C11 C C doub 1.4 N Y
19 C15 C14 C C doub 1.38 N Y
20 C14 C13 C C sing 1.39 N Y
21 C13 O7 C O sing 1.36 N N
22 C13 C12 C C doub 1.39 N Y
23 O7 C16 O C sing 1.43 N N
24 C12 C11 C C sing 1.38 N Y
25 O6 HO6 O H sing 0.97 N N
26 C6 H61 C H sing 1.09 N N
27 C6 H62 C H sing 1.09 N N
28 C5 H5 C H sing 1.09 N N
29 C4 H4 C H sing 1.09 N N
30 C1 H1 C H sing 1.09 N N
31 O4 HO4 O H sing 0.97 N N
32 C3 H3 C H sing 1.09 N N
33 O3 HO3 O H sing 0.97 N N
34 C2 H2 C H sing 1.09 N N
35 O2 HO2 O H sing 0.97 N N
36 C7 H71C C H sing 1.09 N N
37 C7 H72C C H sing 1.09 N N
38 C15 H15 C H sing 1.08 N N
39 C11 H11 C H sing 1.08 N N
40 C14 H14 C H sing 1.08 N N
41 C12 H12 C H sing 1.08 N N
42 C16 H161 C H sing 1.09 N N
43 C16 H162 C H sing 1.09 N N
44 C16 H163 C H sing 1.09 N N