Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GY4    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C1 O C doub 1.22 N N
2 C16 C17 C C sing 1.55 N N
3 C16 C15 C C sing 1.55 N N
4 C1 N3 C N sing 1.35 N N
5 C1 C2 C C sing 1.47 N N
6 C17 C6 C C sing 1.54 N N
7 N3 C5 N C sing 1.35 N N
8 C15 N2 C N sing 1.47 N N
9 O2 C2 O C sing 1.36 N N
10 C2 C3 C C doub 1.39 N N
11 C5 C6 C C sing 1.51 N N
12 C5 N1 C N doub 1.3 N N
13 C6 N2 C N sing 1.47 N N
14 N2 C7 N C sing 1.35 N N
15 C3 N1 C N sing 1.35 N N
16 C3 C4 C C sing 1.48 N N
17 O3 C4 O C doub 1.21 N N
18 C8 C7 C C sing 1.51 N N
19 C8 C9 C C sing 1.51 N N
20 C7 O5 C O doub 1.21 N N
21 C4 O4 C O sing 1.35 N N
22 C9 C10 C C doub 1.38 N Y
23 C9 C14 C C sing 1.38 N Y
24 C10 C11 C C sing 1.38 N Y
25 C14 C13 C C doub 1.38 N Y
26 C11 C12 C C doub 1.38 N Y
27 C13 C12 C C sing 1.38 N Y
28 C12 CL1 C CL sing 1.74 N N
29 C10 H1 C H sing 1.08 N N
30 C11 H2 C H sing 1.08 N N
31 C13 H3 C H sing 1.08 N N
32 C14 H4 C H sing 1.08 N N
33 C15 H5 C H sing 1.09 N N
34 C15 H6 C H sing 1.09 N N
35 C16 H7 C H sing 1.09 N N
36 C16 H8 C H sing 1.09 N N
37 C17 H9 C H sing 1.09 N N
38 C17 H10 C H sing 1.09 N N
39 C6 H11 C H sing 1.09 N N
40 C8 H12 C H sing 1.09 N N
41 C8 H13 C H sing 1.09 N N
42 N3 H14 N H sing 0.97 N N
43 O2 H15 O H sing 0.97 N N
44 O4 H16 O H sing 0.97 N N