Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GY4

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -4.135 0.983 -0.958
2 C10 C C2 N Y N 0 2.903 0.162 1.014
3 C11 C C3 N Y N 0 3.985 0.928 0.623
4 C12 C C4 N Y N 0 4.87 0.443 -0.323
5 C13 C C5 N Y N 0 4.671 -0.809 -0.877
6 C14 C C6 N Y N 0 3.589 -1.574 -0.486
7 C15 C C7 N N N 0 -1.091 -3.266 1.239
8 C16 C C8 N N N 0 -2.271 -4.104 0.688
9 C17 C C9 N N N 0 -3.116 -3.019 -0.03
10 C2 C C10 N N N 0 -3.303 1.954 -0.235
11 C3 C C11 N N N 0 -2.111 1.501 0.311
12 C4 C C12 N N N 0 -1.23 2.431 1.051
13 C5 C C13 N N N 0 -2.51 -0.639 -0.481
14 C6 C C14 S N N 0 -2.043 -2.067 -0.6
15 C7 C C15 N N N 0 0.352 -1.628 -0.003
16 N2 N N2 N N N 0 -0.821 -2.262 0.193
17 C8 C C16 N N N 0 1.528 -1.926 0.891
18 C9 C C17 N Y N 0 2.708 -1.091 0.464
19 N1 N N1 N N N 0 -1.763 0.21 0.162
20 N3 N N3 N N N 0 -3.69 -0.29 -1.047
21 O1 O O1 N N N 0 -5.196 1.314 -1.457
22 O2 O O2 N N N 0 -3.687 3.248 -0.106
23 O3 O O3 N N N 0 -1.549 3.595 1.182
24 O4 O O4 N N N 0 -0.073 1.985 1.578
25 O5 O O5 N N N 0 0.461 -0.817 -0.898
26 CL1 CL CL1 N N N 0 6.229 1.405 -0.815
27 H1 H H1 N N N 0 2.212 0.54 1.753
28 H2 H H2 N N N 0 4.139 1.905 1.056
29 H3 H H3 N N N 0 5.362 -1.188 -1.616
30 H4 H H4 N N N 0 3.434 -2.551 -0.919
31 H5 H H5 N N N 0 -1.375 -2.776 2.17
32 H6 H H6 N N N 0 -0.215 -3.896 1.394
33 H7 H H7 N N N 0 -1.92 -4.857 -0.018
34 H8 H H8 N N N 0 -2.835 -4.565 1.499
35 H9 H H9 N N N 0 -3.707 -3.459 -0.833
36 H10 H H10 N N N 0 -3.757 -2.497 0.68
37 H11 H H11 N N N 0 -1.852 -2.308 -1.646
38 H12 H H12 N N N 0 1.27 -1.689 1.923
39 H13 H H13 N N N 0 1.784 -2.983 0.813
40 H14 H H14 N N N 0 -4.216 -0.955 -1.518
41 H15 H H15 N N N 0 -4.534 3.45 -0.526
42 H16 H H16 N N N 0 0.47 2.629 2.053