Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : FDF    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O2A PA O P doub 1.48 N N
2 O3A PA O P sing 1.61 N N
3 PA O1A P O sing 1.61 N N
4 PA O1 P O sing 1.61 N N
5 O2B PB O P doub 1.48 N N
6 O1B PB O P sing 1.61 N N
7 O3B PB O P sing 1.61 N N
8 PB O3A P O sing 1.61 N N
9 C1 O1 C O sing 1.43 N N
10 C1 C2 C C sing 1.51 N N
11 C1 H1 C H sing 1.09 E N
12 C1 H1A C H sing 1.09 N N
13 O1A HO1A O H sing 0.97 N N
14 O1B HO1B O H sing 0.97 N N
15 C2 C3 C C doub 1.31 N N
16 C2 H2 C H sing 1.08 N N
17 C3 C4 C C sing 1.51 N N
18 C3 C5 C C sing 1.51 N N
19 O3B HO3B O H sing 0.97 N N
20 C4 H4 C H sing 1.09 N N
21 C4 H4A C H sing 1.09 N N
22 C4 H4B C H sing 1.09 N N
23 C6 C5 C C sing 1.53 N N
24 C5 H5 C H sing 1.09 N N
25 C5 H5A C H sing 1.09 N N
26 C7 C6 C C sing 1.51 N N
27 C6 H6 C H sing 1.09 N N
28 C6 H6A C H sing 1.09 N N
29 C8 C7 C C doub 1.31 N N
30 C7 H7 C H sing 1.08 E N
31 C9 C8 C C sing 1.51 N N
32 C8 C10 C C sing 1.51 N N
33 C11 C9 C C sing 1.53 N N
34 C9 H9 C H sing 1.09 N N
35 C9 H9A C H sing 1.09 N N
36 C10 H10 C H sing 1.09 N N
37 C10 H10A C H sing 1.09 N N
38 C10 H10B C H sing 1.09 N N
39 C11 C12 C C sing 1.51 N N
40 C11 H11 C H sing 1.09 N N
41 C11 H11A C H sing 1.09 N N
42 C13 C12 C C doub 1.31 N N
43 C12 H12 C H sing 1.08 N N
44 C15 C13 C C sing 1.51 N N
45 C13 C14 C C sing 1.51 N N
46 F2 C14 F C sing 1.4 N N
47 C14 H14 C H sing 1.09 N N
48 C14 H14A C H sing 1.09 N N
49 C15 F1 C F sing 1.4 N N
50 C15 H15 C H sing 1.09 N N
51 C15 H15A C H sing 1.09 N N