Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : FAD    

Bonds between two atoms of the molecule

Total Number of Bonds: 91


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 PA O1A P O doub 1.48 N N
2 PA O2A P O sing 1.61 N N
3 PA O5B P O sing 1.61 N N
4 PA O3P P O sing 1.61 N N
5 O2A HOA2 O H sing 0.97 N N
6 O5B C5B O C sing 1.43 N N
7 C5B C4B C C sing 1.53 N N
8 C5B H51A C H sing 1.09 N N
9 C5B H52A C H sing 1.09 N N
10 C4B O4B C O sing 1.44 N N
11 C4B C3B C C sing 1.54 N N
12 C4B H4B C H sing 1.09 N N
13 O4B C1B O C sing 1.44 N N
14 C3B O3B C O sing 1.43 N N
15 C3B C2B C C sing 1.55 N N
16 C3B H3B C H sing 1.09 N N
17 O3B HO3A O H sing 0.97 N N
18 C2B O2B C O sing 1.43 N N
19 C2B C1B C C sing 1.55 N N
20 C2B H2B C H sing 1.09 N N
21 O2B HO2A O H sing 0.97 N N
22 C1B N9A C N sing 1.46 N N
23 C1B H1B C H sing 1.09 N N
24 N9A C8A N C sing 1.36 N Y
25 N9A C4A N C sing 1.37 N Y
26 C8A N7A C N doub 1.3 N Y
27 C8A H8A C H sing 1.08 N N
28 N7A C5A N C sing 1.35 N Y
29 C5A C6A C C sing 1.41 N Y
30 C5A C4A C C doub 1.4 N Y
31 C6A N6A C N sing 1.38 N N
32 C6A N1A C N doub 1.33 N Y
33 N6A H61A N H sing 0.97 N N
34 N6A H62A N H sing 0.97 N N
35 N1A C2A N C sing 1.32 N Y
36 C2A N3A C N doub 1.32 N Y
37 C2A H2A C H sing 1.08 N N
38 N3A C4A N C sing 1.33 N Y
39 N1 C2 N C sing 1.33 N N
40 N1 C10 N C doub 1.32 N N
41 C2 O2 C O doub 1.22 N N
42 C2 N3 C N sing 1.34 N N
43 N3 C4 N C sing 1.35 N N
44 N3 HN3 N H sing 0.97 N N
45 C4 O4 C O doub 1.22 N N
46 C4 C4X C C sing 1.48 N N
47 C4X N5 C N doub 1.31 N N
48 C4X C10 C C sing 1.47 N N
49 N5 C5X N C sing 1.34 N N
50 C5X C6 C C doub 1.41 N Y
51 C5X C9A C C sing 1.41 N Y
52 C6 C7 C C sing 1.36 N Y
53 C6 H6 C H sing 1.08 N N
54 C7 C7M C C sing 1.51 N N
55 C7 C8 C C doub 1.39 N Y
56 C7M HM71 C H sing 1.09 N N
57 C7M HM72 C H sing 1.09 N N
58 C7M HM73 C H sing 1.09 N N
59 C8 C8M C C sing 1.51 N N
60 C8 C9 C C sing 1.38 N Y
61 C8M HM81 C H sing 1.09 N N
62 C8M HM82 C H sing 1.09 N N
63 C8M HM83 C H sing 1.09 N N
64 C9 C9A C C doub 1.39 N Y
65 C9 H9 C H sing 1.08 N N
66 C9A N10 C N sing 1.38 N N
67 N10 C10 N C sing 1.36 N N
68 N10 C1' N C sing 1.46 N N
69 C1' C2' C C sing 1.53 N N
70 C1' H1'1 C H sing 1.09 N N
71 C1' H1'2 C H sing 1.09 N N
72 C2' O2' C O sing 1.43 N N
73 C2' C3' C C sing 1.53 N N
74 C2' H2' C H sing 1.09 N N
75 O2' HO2' O H sing 0.97 N N
76 C3' O3' C O sing 1.43 N N
77 C3' C4' C C sing 1.53 N N
78 C3' H3' C H sing 1.09 N N
79 O3' HO3' O H sing 0.97 N N
80 C4' O4' C O sing 1.43 N N
81 C4' C5' C C sing 1.53 N N
82 C4' H4' C H sing 1.09 N N
83 O4' HO4' O H sing 0.97 N N
84 C5' O5' C O sing 1.43 N N
85 C5' H5'1 C H sing 1.09 N N
86 C5' H5'2 C H sing 1.09 N N
87 O5' P O P sing 1.61 N N
88 P O1P P O doub 1.48 N N
89 P O2P P O sing 1.61 N N
90 P O3P P O sing 1.61 N N
91 O2P HOP2 O H sing 0.97 N N