Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : FAD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 86


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 PA P AP R N N 0 -1.648 -0.629 -3.229
2 O1A O AO1 N N N 0 -3.035 -1.088 -2.992
3 O2A O AO2 N N N 0 -0.678 -1.906 -3.378
4 O5B O AO5* N N N 0 -1.595 0.245 -4.58
5 C5B C AC5* N N N 0 -2.036 -0.605 -5.64
6 C4B C AC4* R N N 0 -2.009 0.169 -6.959
7 O4B O AO4* N N N 0 -0.665 0.583 -7.256
8 C3B C AC3* S N N 0 -2.476 -0.741 -8.111
9 O3B O AO3* N N N 0 -3.639 -0.203 -8.744
10 C2B C AC2* R N N 0 -1.277 -0.748 -9.095
11 O2B O AO2* N N N 0 -1.728 -0.672 -10.449
12 C1B C AC1* R N N 0 -0.518 0.541 -8.692
13 N9A N AN9 N Y N 0 0.895 0.449 -9.063
14 C8A C AC8 N Y N 0 1.889 -0.118 -8.322
15 N7A N AN7 N Y N 0 3.023 -0.024 -8.953
16 C5A C AC5 N Y N 0 2.83 0.606 -10.136
17 C6A C AC6 N Y N 0 3.663 0.979 -11.205
18 N6A N AN6 N N N 0 5.018 0.698 -11.178
19 N1A N AN1 N Y N 0 3.119 1.607 -12.242
20 C2A C AC2 N Y N 0 1.827 1.878 -12.277
21 N3A N AN3 N Y N 0 1.01 1.549 -11.299
22 C4A C AC4 N Y N 0 1.462 0.914 -10.223
23 N1 N N1 N N N 0 -1.933 0.36 8.321
24 C2 C C2 N N N 0 -2.802 1.033 9.07
25 O2 O O2 N N N 0 -3.97 1.043 8.721
26 N3 N N3 N N N 0 -2.474 1.701 10.185
27 C4 C C4 N N N 0 -1.197 1.734 10.634
28 O4 O O4 N N N 0 -0.897 2.34 11.644
29 C4X C C4A N N N 0 -0.184 1.003 9.842
30 N5 N N5 N N N 0 1.078 0.968 10.185
31 C5X C C5A N Y N 0 1.969 0.295 9.446
32 C6 C C6 N Y N 0 3.324 0.27 9.833
33 C7 C C7 N Y N 0 4.232 -0.412 9.082
34 C7M C C7M N N N 0 5.679 -0.434 9.502
35 C8 C C8 N Y N 0 3.841 -1.085 7.93
36 C8M C C8M N N N 0 4.866 -1.832 7.116
37 C9 C C9 N Y N 0 2.523 -1.082 7.529
38 C9A C C9A N Y N 0 1.572 -0.393 8.278
39 N10 N N10 N N N 0 0.253 -0.382 7.877
40 C10 C C10 N N N 0 -0.649 0.301 8.634
41 C1' C C1* N N N 0 -0.168 -1.093 6.668
42 C2' C C2* S N N 0 -0.07 -0.153 5.464
43 O2' O O2* N N N 0 -0.919 0.977 5.673
44 C3' C C3* S N N 0 -0.511 -0.895 4.201
45 O3' O O3* N N N 0 0.337 -2.026 3.992
46 C4' C C4* R N N 0 -0.413 0.044 2.997
47 O4' O O4* N N N 0 -1.262 1.174 3.206
48 C5' C C5* N N N 0 -0.854 -0.697 1.734
49 O5' O O5* N N N 0 -0.763 0.179 0.61
50 P P P R N N 0 -1.239 -0.662 -0.677
51 O1P O O1P N N N 0 -0.354 -1.835 -0.853
52 O2P O O2P N N N 0 -2.754 -1.16 -0.462
53 H52A H AH52 N N N 0 -3.052 -0.942 -5.437
54 O3P O O3P N N N 0 -1.161 0.27 -1.987
55 HOA2 H 2HOA N N N 0 0.212 -1.564 -3.531
56 H51A H AH51 N N N 0 -1.374 -1.468 -5.712
57 H4B H AH4* N N N 0 -2.659 1.041 -6.89
58 H3B H AH3* N N N 0 -2.674 -1.748 -7.744
59 HO3A H AHO3 N N N 0 -3.845 -0.782 -9.49
60 H2B H AH2* N N N 0 -0.653 -1.63 -8.944
61 HO2A H AHO2 N N N 0 -2.19 -1.501 -10.636
62 H1B H AH1* N N N 0 -0.978 1.416 -9.15
63 H8A H AH8 N N N 0 1.754 -0.577 -7.354
64 H61A H AH61 N N N 0 5.582 0.96 -11.922
65 H6 H H6 N N N 0 3.641 0.792 10.723
66 H62A H AH62 N N N 0 5.403 0.239 -10.415
67 H2A H AH2 N N N 0 1.427 2.391 -13.139
68 HN3 H HN3 N N N 0 -3.164 2.169 10.679
69 HM71 H 1HM7 N N N 0 5.853 -1.285 10.162
70 HM72 H 2HM7 N N N 0 6.313 -0.523 8.62
71 HM73 H 3HM7 N N N 0 5.919 0.488 10.03
72 HM81 H 1HM8 N N N 0 5.285 -1.167 6.361
73 HM82 H 2HM8 N N N 0 5.662 -2.185 7.772
74 HM83 H 3HM8 N N N 0 4.393 -2.684 6.628
75 H9 H H9 N N N 0 2.228 -1.609 6.634
76 H1'1 H 1H1* N N N 0 0.478 -1.955 6.508
77 H1'2 H 2H1* N N N 0 -1.198 -1.428 6.784
78 H2' H H2* N N N 0 0.959 0.182 5.348
79 HO2' H *HO2 N N N 0 -1.819 0.637 5.771
80 H3' H H3* N N N 0 -1.541 -1.231 4.317
81 HO3' H *HO3 N N N 0 1.237 -1.686 3.894
82 H4' H H4* N N N 0 0.616 0.379 2.881
83 HOP2 H 2HOP N N N 0 -3.296 -0.367 -0.351
84 HO4' H *HO4 N N N 0 -2.162 0.834 3.304
85 H5'1 H 1H5* N N N 0 -0.207 -1.56 1.575
86 H5'2 H 2H5* N N N 0 -1.884 -1.033 1.85