Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : EMH    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C6 C C doub 1.37 N Y
2 C4 C2 C C sing 1.4 N Y
3 C5 C6 C C sing 1.4 N Y
4 C5 C18 C C sing 1.43 N N
5 C5 C3 C C doub 1.4 N Y
6 C7 C8 C C doub 1.38 N Y
7 C7 C2 C C sing 1.45 N Y
8 C7 C16 C C sing 1.47 N N
9 C8 C17 C C sing 1.5 N N
10 C8 N9 C N sing 1.36 N Y
11 C10 C12 C C doub 1.39 N Y
12 C10 C11 C C sing 1.39 N Y
13 C10 N25 C N sing 1.39 N N
14 C13 C15 C C sing 1.4 N Y
15 C13 C11 C C doub 1.38 N Y
16 C15 C14 C C doub 1.39 N Y
17 C15 C16 C C sing 1.48 N N
18 C17 C21 C C sing 1.53 N N
19 C17 C22 C C sing 1.53 N N
20 C17 C14 C C sing 1.5 N N
21 C24 C23 C C sing 1.53 N N
22 C26 C28 C C sing 1.53 N N
23 C26 C27 C C sing 1.53 N N
24 C26 N31 C N sing 1.47 N N
25 C28 C30 C C sing 1.53 N N
26 N19 C18 N C trip 1.14 N N
27 C3 C1 C C sing 1.39 N Y
28 C1 C2 C C doub 1.42 N Y
29 C1 N9 C N sing 1.37 N Y
30 C14 C12 C C sing 1.38 N Y
31 C16 O20 C O doub 1.22 N N
32 C11 C23 C C sing 1.51 N N
33 N25 C29 N C sing 1.47 N N
34 N25 C30 N C sing 1.47 N N
35 C29 C27 C C sing 1.53 N N
36 N31 C32 N C sing 1.47 N N
37 N31 C33 N C sing 1.47 N N
38 C32 C34 C C sing 1.53 N N
39 C34 O36 C O sing 1.43 N N
40 O36 C35 O C sing 1.43 N N
41 C35 C33 C C sing 1.53 N N
42 C4 H4 C H sing 1.08 N N
43 C6 H6 C H sing 1.08 N N
44 C13 H13 C H sing 1.08 N N
45 C21 H21 C H sing 1.09 N N
46 C21 H21A C H sing 1.09 N N
47 C21 H21B C H sing 1.09 N N
48 C22 H22 C H sing 1.09 N N
49 C22 H22A C H sing 1.09 N N
50 C22 H22B C H sing 1.09 N N
51 C24 H24 C H sing 1.09 N N
52 C24 H24A C H sing 1.09 N N
53 C24 H24B C H sing 1.09 N N
54 C26 H26 C H sing 1.09 N N
55 C28 H28 C H sing 1.09 N N
56 C28 H28A C H sing 1.09 N N
57 C3 H3 C H sing 1.08 N N
58 C12 H12 C H sing 1.08 N N
59 C23 H23 C H sing 1.09 N N
60 C23 H23A C H sing 1.09 N N
61 C29 H29 C H sing 1.09 N N
62 C29 H29A C H sing 1.09 N N
63 C27 H27 C H sing 1.09 N N
64 C27 H27A C H sing 1.09 N N
65 C30 H30 C H sing 1.09 N N
66 C30 H30A C H sing 1.09 N N
67 C32 H32 C H sing 1.09 N N
68 C32 H32A C H sing 1.09 N N
69 C34 H34 C H sing 1.09 N N
70 C34 H34A C H sing 1.09 N N
71 C35 H35 C H sing 1.09 N N
72 C35 H35A C H sing 1.09 N N
73 C33 H33 C H sing 1.09 N N
74 C33 H33A C H sing 1.09 N N
75 N9 H9 N H sing 0.97 N N