Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : EMH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -5.46 1.127 0.085
2 C10 C C10 N Y N 0 1.283 -0.848 -0.281
3 C11 C C11 N Y N 0 0.791 -2.145 -0.163
4 C12 C C12 N Y N 0 0.411 0.22 -0.449
5 C13 C C13 N Y N 0 -0.566 -2.365 -0.208
6 C14 C C14 N Y N 0 -0.956 0.011 -0.499
7 C15 C C15 N Y N 0 -1.444 -1.289 -0.372
8 C16 C C16 N N N 0 -2.905 -1.554 -0.393
9 C17 C C17 N N N 0 -1.844 1.21 -0.693
10 C18 C C18 N N N 0 -9.07 1.055 0.851
11 C2 C C2 N Y N 0 -5.187 -0.266 0.048
12 C21 C C21 N N N 0 -1.362 2.339 0.221
13 C22 C C22 N N N 0 -1.743 1.672 -2.148
14 C23 C C23 N N N 0 1.74 -3.303 0.013
15 C24 C C24 N N N 0 2.086 -3.457 1.495
16 C26 C C26 N N N 0 5.088 0.932 -0.316
17 C27 C C27 N N N 0 4.523 0.381 0.996
18 C28 C C28 N N N 0 4.672 0.013 -1.468
19 C29 C C29 N N N 0 3.0 0.27 0.883
20 C3 C C3 N Y N 0 -6.742 1.592 0.35
21 C30 C C30 N N N 0 3.145 -0.087 -1.509
22 C32 C C32 N N N 0 6.99 1.952 0.784
23 C33 C C33 N N N 0 7.115 -0.345 0.034
24 C34 C C34 N N N 0 8.519 2.02 0.793
25 C35 C C35 N N N 0 8.644 -0.254 0.051
26 C4 C C4 N Y N 0 -6.19 -1.213 0.273
27 C5 C C5 N Y N 0 -7.732 0.628 0.573
28 C6 C C6 N Y N 0 -7.45 -0.741 0.532
29 C7 C C7 N Y N 0 -3.773 -0.376 -0.246
30 C8 C C8 N Y N 0 -3.281 0.904 -0.376
31 H12 H H12 N N N 0 0.803 1.222 -0.54
32 H13 H H13 N N N 0 -0.953 -3.369 -0.117
33 H21 H H21 N N N 0 -1.451 2.026 1.262
34 H21A H H21A N N N 0 -0.32 2.567 -0.0020
35 H21B H H21B N N N 0 -1.973 3.226 0.055
36 H22 H H22 N N N 0 -2.349 2.567 -2.288
37 H22A H H22A N N N 0 -0.703 1.896 -2.387
38 H22B H H22B N N N 0 -2.105 0.882 -2.806
39 H23 H H23 N N N 0 2.651 -3.115 -0.555
40 H23A H H23A N N N 0 1.269 -4.217 -0.347
41 H24 H H24 N N N 0 1.175 -3.645 2.064
42 H24A H H24A N N N 0 2.773 -4.294 1.623
43 H24B H H24B N N N 0 2.558 -2.543 1.856
44 H26 H H26 N N N 0 4.694 1.934 -0.49
45 H27 H H27 N N N 0 4.946 -0.605 1.188
46 H27A H H27A N N N 0 4.779 1.054 1.814
47 H28 H H28 N N N 0 5.035 0.423 -2.41
48 H28A H H28A N N N 0 5.098 -0.979 -1.314
49 H29 H H29 N N N 0 2.576 1.258 0.704
50 H29A H H29A N N N 0 2.596 -0.136 1.811
51 H3 H H3 N N N 0 -6.965 2.648 0.381
52 H30 H H30 N N N 0 2.721 0.902 -1.677
53 H30A H H30A N N N 0 2.847 -0.753 -2.319
54 H32 H H32 N N N 0 6.583 2.936 0.55
55 H32A H H32A N N N 0 6.633 1.633 1.763
56 H33 H H33 N N N 0 6.761 -0.701 1.002
57 H33A H H33A N N N 0 6.801 -1.038 -0.746
58 H34 H H34 N N N 0 8.873 2.39 -0.17
59 H34A H H34A N N N 0 8.849 2.692 1.585
60 H35 H H35 N N N 0 9.001 0.05 -0.933
61 H35A H H35A N N N 0 9.063 -1.227 0.307
62 H4 H H4 N N N 0 -5.979 -2.272 0.247
63 H6 H H6 N N N 0 -8.248 -1.447 0.71
64 H9 H H9 N N N 0 -4.193 2.753 -0.207
65 N19 N N19 N N N 0 -10.132 1.394 1.072
66 N25 N N25 N N N 0 2.654 -0.621 -0.232
67 N31 N N31 N N N 0 6.553 0.986 -0.235
68 N9 N N9 N Y N 0 -4.288 1.788 -0.174
69 O20 O O20 N N N 0 -3.357 -2.677 -0.523
70 O36 O O36 N N N 0 9.048 0.712 1.025