Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
E58
Bonds between two atoms of the molecule
Total Number of Bonds: 35
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OAG
NAF
O
N
doub
1.22
N
N
2
CAC
CAD
C
C
sing
1.4
N
Y
3
CAC
CAB
C
C
doub
1.35
N
Y
4
CAD
CAE
C
C
doub
1.37
N
Y
5
CAS
OAR
C
O
sing
1.43
N
N
6
NAF
CAB
N
C
sing
1.48
N
N
7
NAF
OAH
N
O
sing
1.22
N
N
8
OAV
CAT
O
C
sing
1.35
N
N
9
OAV
CAW
O
C
sing
1.45
N
N
10
CAB
OAA
C
O
sing
1.34
N
Y
11
OAU
CAT
O
C
doub
1.21
N
N
12
CAN
CAM
C
C
doub
1.38
N
Y
13
CAN
CAO
C
C
sing
1.4
N
Y
14
CAT
CAO
C
C
sing
1.48
N
N
15
OAR
CAM
O
C
sing
1.36
N
N
16
CAM
CAL
C
C
sing
1.4
N
Y
17
CAO
CAP
C
C
doub
1.4
N
Y
18
CAE
OAA
C
O
sing
1.35
N
Y
19
CAE
CAI
C
C
sing
1.46
N
N
20
CAP
CAQ
C
C
sing
1.38
N
Y
21
CAL
CAQ
C
C
doub
1.39
N
Y
22
CAL
OAK
C
O
sing
1.36
N
N
23
OAK
CAI
O
C
sing
1.35
N
N
24
CAI
OAJ
C
O
doub
1.22
N
N
25
CAC
H1
C
H
sing
1.08
N
N
26
CAD
H2
C
H
sing
1.08
N
N
27
CAN
H3
C
H
sing
1.08
N
N
28
CAP
H4
C
H
sing
1.08
N
N
29
CAQ
H5
C
H
sing
1.08
N
N
30
CAS
H6
C
H
sing
1.09
N
N
31
CAS
H7
C
H
sing
1.09
N
N
32
CAS
H8
C
H
sing
1.09
N
N
33
CAW
H9
C
H
sing
1.09
N
N
34
CAW
H10
C
H
sing
1.09
N
N
35
CAW
H11
C
H
sing
1.09
N
N