data_E58
#
_chem_comp.id E58
_chem_comp.name "(2-methoxy-4-methoxycarbonyl-phenyl) 5-nitrofuran-2-carboxylate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H11 N O8"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-04-18
_chem_comp.pdbx_modified_date 2022-04-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 321.239
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code E58
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7XIS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E58 CAB C1 C 0 1 Y N N N N N 14.171 -12.769 -17.039 4.706 0.247 -0.084 CAB E58 1
E58 CAC C2 C 0 1 Y N N N N N 13.892 -13.535 -18.092 4.770 0.019 -1.414 CAC E58 2
E58 CAD C3 C 0 1 Y N N N N N 13.554 -14.723 -17.602 3.451 -0.116 -1.874 CAD E58 3
E58 CAE C4 C 0 1 Y N N N N N 13.637 -14.599 -16.278 2.638 0.040 -0.786 CAE E58 4
E58 CAI C5 C 0 1 N N N N N N 13.416 -15.545 -15.379 1.175 -0.022 -0.789 CAI E58 5
E58 CAL C6 C 0 1 Y N N N N N 11.604 -16.700 -16.102 -0.865 0.190 0.295 CAL E58 6
E58 CAM C7 C 0 1 Y N N N N N 11.000 -17.861 -16.580 -1.599 -0.996 0.331 CAM E58 7
E58 CAN C8 C 0 1 Y N N N N N 9.636 -17.853 -16.838 -2.978 -0.957 0.271 CAN E58 8
E58 CAO C9 C 0 1 Y N N N N N 8.876 -16.709 -16.557 -3.636 0.273 0.173 CAO E58 9
E58 CAP C10 C 0 1 Y N N N N N 9.497 -15.550 -16.137 -2.895 1.457 0.137 CAP E58 10
E58 CAQ C11 C 0 1 Y N N N N N 10.843 -15.564 -15.851 -1.519 1.411 0.198 CAQ E58 11
E58 CAS C12 C 0 1 N N N N N N 11.073 -20.092 -17.286 -1.770 -3.365 0.458 CAS E58 12
E58 CAT C13 C 0 1 N N N N N N 7.519 -16.591 -16.824 -5.109 0.320 0.107 CAT E58 13
E58 CAW C14 C 0 1 N N N N N N 6.749 -18.563 -15.895 -7.191 1.478 -0.047 CAW E58 14
E58 NAF N1 N 1 1 N N N N N N 14.557 -11.503 -17.100 5.867 0.457 0.811 NAF E58 15
E58 OAA O1 O 0 1 Y N N N N N 14.032 -13.443 -15.943 3.421 0.259 0.291 OAA E58 16
E58 OAG O2 O 0 1 N N N N N N 14.688 -10.898 -18.343 5.691 0.661 1.999 OAG E58 17
E58 OAH O3 O -1 1 N N N N N N 14.762 -10.815 -15.871 6.998 0.425 0.360 OAH E58 18
E58 OAJ O4 O 0 1 N N N N N N 13.513 -15.249 -14.191 0.577 -0.228 -1.829 OAJ E58 19
E58 OAK O5 O 0 1 N N N N N N 12.943 -16.742 -15.840 0.490 0.150 0.360 OAK E58 20
E58 OAR O6 O 0 1 N N N N N N 11.798 -18.954 -16.788 -0.956 -2.191 0.426 OAR E58 21
E58 OAU O7 O 0 1 N N N N N N 7.004 -15.474 -16.909 -5.752 -0.710 0.138 OAU E58 22
E58 OAV O8 O 0 1 N N N N N N 6.851 -17.738 -17.076 -5.741 1.507 0.013 OAV E58 23
E58 H1 H1 H 0 1 N N N N N N 13.932 -13.249 -19.133 5.667 -0.048 -2.012 H1 E58 24
E58 H2 H2 H 0 1 N N N N N N 13.271 -15.604 -18.160 3.139 -0.305 -2.890 H2 E58 25
E58 H3 H3 H 0 1 N N N N N N 9.160 -18.728 -17.255 -3.547 -1.874 0.299 H3 E58 26
E58 H4 H4 H 0 1 N N N N N N 8.929 -14.637 -16.033 -3.400 2.408 0.061 H4 E58 27
E58 H5 H5 H 0 1 N N N N N N 11.311 -14.687 -15.429 -0.947 2.327 0.175 H5 E58 28
E58 H6 H6 H 0 1 N N N N N N 11.766 -20.934 -17.432 -2.436 -3.321 1.320 H6 E58 29
E58 H7 H7 H 0 1 N N N N N N 10.297 -20.378 -16.561 -2.362 -3.422 -0.455 H7 E58 30
E58 H8 H8 H 0 1 N N N N N N 10.601 -19.835 -18.246 -1.133 -4.246 0.535 H8 E58 31
E58 H9 H9 H 0 1 N N N N N N 6.201 -19.485 -16.138 -7.583 1.008 0.855 H9 E58 32
E58 H10 H10 H 0 1 N N N N N N 7.758 -18.819 -15.539 -7.572 2.496 -0.121 H10 E58 33
E58 H11 H11 H 0 1 N N N N N N 6.211 -18.013 -15.109 -7.507 0.907 -0.920 H11 E58 34
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E58 OAG NAF DOUB N N 1
E58 CAC CAD SING Y N 2
E58 CAC CAB DOUB Y N 3
E58 CAD CAE DOUB Y N 4
E58 CAS OAR SING N N 5
E58 NAF CAB SING N N 6
E58 NAF OAH SING N N 7
E58 OAV CAT SING N N 8
E58 OAV CAW SING N N 9
E58 CAB OAA SING Y N 10
E58 OAU CAT DOUB N N 11
E58 CAN CAM DOUB Y N 12
E58 CAN CAO SING Y N 13
E58 CAT CAO SING N N 14
E58 OAR CAM SING N N 15
E58 CAM CAL SING Y N 16
E58 CAO CAP DOUB Y N 17
E58 CAE OAA SING Y N 18
E58 CAE CAI SING N N 19
E58 CAP CAQ SING Y N 20
E58 CAL CAQ DOUB Y N 21
E58 CAL OAK SING N N 22
E58 OAK CAI SING N N 23
E58 CAI OAJ DOUB N N 24
E58 CAC H1 SING N N 25
E58 CAD H2 SING N N 26
E58 CAN H3 SING N N 27
E58 CAP H4 SING N N 28
E58 CAQ H5 SING N N 29
E58 CAS H6 SING N N 30
E58 CAS H7 SING N N 31
E58 CAS H8 SING N N 32
E58 CAW H9 SING N N 33
E58 CAW H10 SING N N 34
E58 CAW H11 SING N N 35
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E58 InChI InChI 1.03 InChI=1S/C14H11NO8/c1-20-11-7-8(13(16)21-2)3-4-9(11)23-14(17)10-5-6-12(22-10)15(18)19/h3-7H,1-2H3
E58 InChIKey InChI 1.03 GPPPJBXPBOWUNP-UHFFFAOYSA-N
E58 SMILES_CANONICAL CACTVS 3.385 COC(=O)c1ccc(OC(=O)c2oc(cc2)[N+]([O-])=O)c(OC)c1
E58 SMILES CACTVS 3.385 COC(=O)c1ccc(OC(=O)c2oc(cc2)[N+]([O-])=O)c(OC)c1
E58 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 COc1cc(ccc1OC(=O)c2ccc(o2)[N+](=O)[O-])C(=O)OC
E58 SMILES "OpenEye OEToolkits" 2.0.7 COc1cc(ccc1OC(=O)c2ccc(o2)[N+](=O)[O-])C(=O)OC
#
_pdbx_chem_comp_identifier.comp_id E58
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(2-methoxy-4-methoxycarbonyl-phenyl) 5-nitrofuran-2-carboxylate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E58 'Create component' 2022-04-18 PDBJ
E58 'Initial release' 2022-04-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
E58 CAB C 7.446 5.112 1
E58 CAC C 8.946 5.112 2
E58 CAD C 9.410 3.686 3
E58 CAE C 8.196 2.804 4
E58 CAI C 8.196 1.304 5
E58 CAL C 6.897 -0.946 6
E58 CAM C 5.598 -1.696 7
E58 CAN C 5.598 -3.196 8
E58 CAO C 6.897 -3.946 9
E58 CAP C 8.196 -3.196 10
E58 CAQ C 8.196 -1.696 11
E58 CAS C 3.000 -1.696 12
E58 CAT C 6.897 -5.446 13
E58 CAW C 8.196 -7.696 14
E58 NAF N 6.564 6.326 15
E58 OAA O 6.983 3.686 16
E58 OAG O 7.175 7.696 17
E58 OAH O 5.073 6.169 18
E58 OAJ O 9.495 0.554 19
E58 OAK O 6.897 0.554 20
E58 OAR O 4.299 -0.946 21
E58 OAU O 5.598 -6.196 22
E58 OAV O 8.196 -6.196 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
E58 OAG NAF DOUBLE NONE 1
E58 CAC CAD SINGLE NONE 2
E58 CAC CAB DOUBLE NONE 3
E58 CAD CAE DOUBLE NONE 4
E58 CAS OAR SINGLE NONE 5
E58 NAF CAB SINGLE NONE 6
E58 NAF OAH SINGLE NONE 7
E58 OAV CAT SINGLE NONE 8
E58 OAV CAW SINGLE NONE 9
E58 CAB OAA SINGLE NONE 10
E58 OAU CAT DOUBLE NONE 11
E58 CAN CAM DOUBLE NONE 12
E58 CAN CAO SINGLE NONE 13
E58 CAT CAO SINGLE NONE 14
E58 OAR CAM SINGLE NONE 15
E58 CAM CAL SINGLE NONE 16
E58 CAO CAP DOUBLE NONE 17
E58 CAE OAA SINGLE NONE 18
E58 CAE CAI SINGLE NONE 19
E58 CAP CAQ SINGLE NONE 20
E58 CAL CAQ DOUBLE NONE 21
E58 CAL OAK SINGLE NONE 22
E58 OAK CAI SINGLE NONE 23
E58 CAI OAJ DOUBLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
E58 MurckoScaffold S1 scaffold O=C(Oc1ccccc1)c1ccco1 InChI=1S/C11H8O3/c12-11(10-7-4-8-13-10)14-9-5-2-1-3-6-9/h1-8H YYHDAWBGVZLMAD-UHFFFAOYSA-N
E58 furan F1 fragment c1ccoc1 InChI=1S/C4H4O/c1-2-4-5-3-1/h1-4H YLQBMQCUIZJEEH-UHFFFAOYSA-N
E58 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
E58 CAB S1 1
E58 CAC S1 1
E58 CAD S1 1
E58 CAE S1 1
E58 CAI S1 1
E58 CAL S1 1
E58 CAM S1 1
E58 CAN S1 1
E58 CAO S1 1
E58 CAP S1 1
E58 CAQ S1 1
E58 OAA S1 1
E58 OAJ S1 1
E58 OAK S1 1
E58 CAB F1 1
E58 CAC F1 1
E58 CAD F1 1
E58 CAE F1 1
E58 OAA F1 1
E58 CAL F2 1
E58 CAM F2 1
E58 CAN F2 1
E58 CAO F2 1
E58 CAP F2 1
E58 CAQ F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id E58
_pdbe_chem_comp_rdkit_properties.exactmw 321.048
_pdbe_chem_comp_rdkit_properties.amw 321.241
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 34
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.143
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 144.514
_pdbe_chem_comp_rdkit_properties.tpsa 118.110
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.787
_pdbe_chem_comp_rdkit_properties.CrippenMR 72.078
_pdbe_chem_comp_rdkit_properties.chi0v 10.713
_pdbe_chem_comp_rdkit_properties.chi1v 5.380
_pdbe_chem_comp_rdkit_properties.chi2v 2.172
_pdbe_chem_comp_rdkit_properties.chi3v 2.172
_pdbe_chem_comp_rdkit_properties.chi4v 1.247
_pdbe_chem_comp_rdkit_properties.chi0n 21.713
_pdbe_chem_comp_rdkit_properties.chi1n 10.880
_pdbe_chem_comp_rdkit_properties.chi2n 2.172
_pdbe_chem_comp_rdkit_properties.chi3n 2.172
_pdbe_chem_comp_rdkit_properties.chi4n 1.247
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.360
_pdbe_chem_comp_rdkit_properties.kappa1 6.816
_pdbe_chem_comp_rdkit_properties.kappa2 6.602
_pdbe_chem_comp_rdkit_properties.kappa3 3.457
_pdbe_chem_comp_rdkit_properties.Phi 1.957
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
E58 UniChem PubChem 163196960
E58 UniChem BRENDA 269430
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
E58 CAB 5.699 -0.057 0.235 ETKDGv3 1
E58 CAC 5.480 0.876 -0.682 ETKDGv3 2
E58 CAD 4.062 0.793 -1.019 ETKDGv3 3
E58 CAE 3.550 -0.182 -0.276 ETKDGv3 4
E58 CAI 2.149 -0.615 -0.285 ETKDGv3 5
E58 CAL -0.155 -0.142 -1.060 ETKDGv3 6
E58 CAM -0.868 -0.088 0.248 ETKDGv3 7
E58 CAN -2.205 -0.265 0.277 ETKDGv3 8
E58 CAO -2.973 -0.475 -0.977 ETKDGv3 9
E58 CAP -2.318 -0.473 -2.152 ETKDGv3 10
E58 CAQ -0.855 -0.292 -2.191 ETKDGv3 11
E58 CAS -0.667 0.264 2.725 ETKDGv3 12
E58 CAT -4.440 -0.667 -0.920 ETKDGv3 13
E58 CAW -6.497 -0.839 0.448 ETKDGv3 14
E58 NAF 6.958 -0.333 0.854 ETKDGv3 15
E58 OAA 4.532 -0.747 0.527 ETKDGv3 16
E58 OAG 7.977 0.323 0.551 ETKDGv3 17
E58 OAH 7.052 -1.331 1.795 ETKDGv3 18
E58 OAJ 1.792 -1.569 0.458 ETKDGv3 19
E58 OAK 1.236 -0.000 -1.150 ETKDGv3 20
E58 OAR -0.126 0.182 1.410 ETKDGv3 21
E58 OAU -5.103 -0.838 -1.981 ETKDGv3 22
E58 OAV -5.091 -0.660 0.318 ETKDGv3 23
E58 H1 6.210 1.560 -1.095 ETKDGv3 24
E58 H2 3.528 1.406 -1.733 ETKDGv3 25
E58 H3 -2.742 -0.232 1.214 ETKDGv3 26
E58 H4 -2.845 -0.614 -3.087 ETKDGv3 27
E58 H5 -0.346 -0.310 -3.147 ETKDGv3 28
E58 H6 -1.412 1.085 2.782 ETKDGv3 29
E58 H7 -1.137 -0.703 3.006 ETKDGv3 30
E58 H8 0.153 0.479 3.441 ETKDGv3 31
E58 H9 -6.772 -0.794 1.521 ETKDGv3 32
E58 H10 -7.034 -0.033 -0.096 ETKDGv3 33
E58 H11 -6.793 -1.829 0.041 ETKDGv3 34
#