Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DEX    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.32 N N
2 C1 C10 C C sing 1.49 N N
3 C1 H1 C H sing 1.08 N N
4 C2 C3 C C sing 1.47 N N
5 C2 H2 C H sing 1.08 N N
6 C3 C4 C C sing 1.47 N N
7 C3 O1 C O doub 1.22 N N
8 C4 C5 C C doub 1.33 N N
9 C4 H4 C H sing 1.08 N N
10 C5 C6 C C sing 1.52 N N
11 C5 C10 C C sing 1.5 N N
12 C6 C7 C C sing 1.53 N N
13 C6 H61 C H sing 1.09 N N
14 C6 H62 C H sing 1.09 N N
15 C7 C8 C C sing 1.53 N N
16 C7 H71 C H sing 1.09 N N
17 C7 H72 C H sing 1.09 N N
18 C8 C9 C C sing 1.54 N N
19 C8 C14 C C sing 1.52 N N
20 C8 H8 C H sing 1.09 N N
21 C9 C10 C C sing 1.53 N N
22 C9 C11 C C sing 1.52 N N
23 C9 F1 C F sing 1.4 N N
24 C10 C19 C C sing 1.53 N N
25 C11 C12 C C sing 1.54 N N
26 C11 O2 C O sing 1.43 N N
27 C11 H11 C H sing 1.09 N N
28 C12 C13 C C sing 1.53 N N
29 C12 H211 C H sing 1.09 N N
30 C12 H221 C H sing 1.09 N N
31 C13 C14 C C sing 1.55 N N
32 C13 C17 C C sing 1.53 N N
33 C13 C18 C C sing 1.53 N N
34 C14 C15 C C sing 1.53 N N
35 C14 H14 C H sing 1.09 N N
36 C15 C16 C C sing 1.55 N N
37 C15 H511 C H sing 1.09 N N
38 C15 H521 C H sing 1.09 N N
39 C16 C17 C C sing 1.55 N N
40 C16 C22 C C sing 1.53 N N
41 C16 H16 C H sing 1.09 N N
42 C17 C20 C C sing 1.51 N N
43 C17 O3 C O sing 1.43 N N
44 C18 H811 C H sing 1.09 N N
45 C18 H821 C H sing 1.09 N N
46 C18 H831 C H sing 1.09 N N
47 C19 H911 C H sing 1.09 N N
48 C19 H921 C H sing 1.09 N N
49 C19 H931 C H sing 1.09 N N
50 C20 C21 C C sing 1.51 N N
51 C20 O4 C O doub 1.21 N N
52 C21 O5 C O sing 1.43 N N
53 C21 H112 C H sing 1.09 N N
54 C21 H122 C H sing 1.09 N N
55 C22 H212 C H sing 1.09 N N
56 C22 H222 C H sing 1.09 N N
57 C22 H232 C H sing 1.09 N N
58 O2 HO2 O H sing 0.97 N N
59 O3 H3 O H sing 0.97 N N
60 O5 H5 O H sing 0.97 N N