Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DDT    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C1 C8A C C sing 1.41 N Y
3 C1 N1 C N sing 1.39 N N
4 C2 C3 C C sing 1.39 N Y
5 C2 HC2 C H sing 1.08 N N
6 C3 C4 C C doub 1.36 N Y
7 C3 HC3 C H sing 1.08 N N
8 C4 C4A C C sing 1.4 N Y
9 C4 HC4 C H sing 1.08 N N
10 C4A C5 C C doub 1.41 N Y
11 C4A C8A C C sing 1.42 N Y
12 C5 C6 C C sing 1.36 N Y
13 C5 S C S sing 1.76 N N
14 C6 C7 C C doub 1.39 N Y
15 C6 HC6 C H sing 1.08 N N
16 C7 C8 C C sing 1.36 N Y
17 C7 HC7 C H sing 1.08 N N
18 C8 C8A C C doub 1.4 N Y
19 C8 HC8 C H sing 1.08 N N
20 C9 N1 C N sing 1.47 N N
21 C9 HC91 C H sing 1.09 N N
22 C9 HC92 C H sing 1.09 N N
23 C9 HC93 C H sing 1.09 N N
24 C10 N1 C N sing 1.47 N N
25 C10 H101 C H sing 1.09 N N
26 C10 H102 C H sing 1.09 N N
27 C10 H103 C H sing 1.09 N N
28 C11 C12 C C sing 1.51 N N
29 C11 C13 C C sing 1.53 N N
30 C11 N C N sing 1.47 N N
31 C11 HC11 C H sing 1.09 N N
32 C12 OC1 C O doub 1.21 N N
33 C12 OC2 C O sing 1.34 N N
34 C13 C14 C C sing 1.51 N N
35 C13 H131 C H sing 1.09 N N
36 C13 H132 C H sing 1.09 N N
37 C14 C15 C C doub 1.38 N Y
38 C14 C19 C C sing 1.38 N Y
39 C15 C16 C C sing 1.38 N Y
40 C15 HC15 C H sing 1.08 N N
41 C16 C17 C C doub 1.39 N Y
42 C16 HC16 C H sing 1.08 N N
43 C17 C18 C C sing 1.39 N Y
44 C17 O C O sing 1.36 N N
45 C18 C19 C C doub 1.38 N Y
46 C18 HC18 C H sing 1.08 N N
47 C19 HC19 C H sing 1.08 N N
48 S O1 S O doub 1.42 N N
49 S O2 S O doub 1.42 N N
50 S N S N sing 1.66 N N
51 N H N H sing 0.97 N N
52 OC2 HXT O H sing 0.97 N N
53 O S' O S sing 1.52 N N
54 S' O1' S O doub 1.42 N N
55 S' O2' S O doub 1.42 N N
56 S' C5' S C sing 1.76 N N
57 C1' C2' C C doub 1.38 N Y
58 C1' C8X C C sing 1.41 N Y
59 C1' N1' C N sing 1.39 N N
60 C2' C3' C C sing 1.39 N Y
61 C2' H2'1 C H sing 1.08 N N
62 C3' C4' C C doub 1.36 N Y
63 C3' H3'1 C H sing 1.08 N N
64 C4' C4X C C sing 1.41 N Y
65 C4' H4'1 C H sing 1.08 N N
66 C4X C5' C C doub 1.4 N Y
67 C4X C8X C C sing 1.42 N Y
68 C5' C6' C C sing 1.36 N Y
69 C6' C7' C C doub 1.39 N Y
70 C6' H6'1 C H sing 1.08 N N
71 C7' C8' C C sing 1.36 N Y
72 C7' H7'1 C H sing 1.08 N N
73 C8' C8X C C doub 1.4 N Y
74 C8' H8'1 C H sing 1.08 N N
75 C9' N1' C N sing 1.47 N N
76 C9' H9'1 C H sing 1.09 N N
77 C9' H9'2 C H sing 1.09 N N
78 C9' H9'3 C H sing 1.09 N N
79 CA' N1' C N sing 1.47 N N
80 CA' HB1 C H sing 1.09 N N
81 CA' HB2 C H sing 1.09 N N
82 CA' HB3 C H sing 1.09 N N