data_DDT
#
_chem_comp.id DDT
_chem_comp.name N,O-DIDANSYL-L-TYROSINE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H33 N3 O7 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 647.761
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code DDT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1JG0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DDT C1 C1 C 0 1 Y N N N N N 13.983 41.833 29.352 0.946 -0.333 7.882 C1 DDT 1
DDT C2 C2 C 0 1 Y N N N N N 15.256 41.315 29.618 -0.391 -0.529 8.152 C2 DDT 2
DDT C3 C3 C 0 1 Y N N N N N 15.702 41.097 30.953 -1.293 -0.795 7.126 C3 DDT 3
DDT C4 C4 C 0 1 Y N N N N N 14.859 41.366 32.022 -0.881 -0.869 5.830 C4 DDT 4
DDT C4A C4A C 0 1 Y N N N N N 13.537 41.897 31.809 0.473 -0.676 5.512 C4A DDT 5
DDT C5 C5 C 0 1 Y N N N N N 12.652 42.221 32.921 0.926 -0.746 4.183 C5 DDT 6
DDT C6 C6 C 0 1 Y N N N N N 11.421 42.818 32.686 2.247 -0.558 3.911 C6 DDT 7
DDT C7 C7 C 0 1 Y N N N N N 10.999 43.127 31.362 3.157 -0.285 4.930 C7 DDT 8
DDT C8 C8 C 0 1 Y N N N N N 11.824 42.819 30.293 2.753 -0.205 6.227 C8 DDT 9
DDT C8A C8A C 0 1 Y N N N N N 13.104 42.185 30.463 1.400 -0.399 6.547 C8A DDT 10
DDT C9 C9 C 0 1 N N N N N N 12.340 41.347 27.567 1.383 1.168 9.563 C9 DDT 11
DDT C10 C10 C 0 1 N N N N N N 14.599 42.031 26.896 1.677 -1.145 9.902 C10 DDT 12
DDT N1 N1 N 0 1 N N N N N N 13.571 42.036 27.985 1.840 -0.068 8.916 N1 DDT 13
DDT C11 C11 C 0 1 N N S N N N 12.411 39.036 34.454 -0.800 1.509 2.430 C11 DDT 14
DDT C12 C12 C 0 1 N N N N N N 11.811 38.820 35.826 -0.954 2.442 3.604 C12 DDT 15
DDT C13 C13 C 0 1 N N N N N N 12.986 37.687 33.907 -1.626 2.031 1.252 C13 DDT 16
DDT C14 C14 C 0 1 Y N N N N N 13.448 37.835 32.474 -1.472 1.099 0.078 C14 DDT 17
DDT C15 C15 C 0 1 Y N N N N N 12.497 38.223 31.499 -2.345 0.038 -0.078 C15 DDT 18
DDT C16 C16 C 0 1 Y N N N N N 12.866 38.363 30.153 -2.206 -0.818 -1.153 C16 DDT 19
DDT C17 C17 C 0 1 Y N N N N N 14.207 38.102 29.792 -1.190 -0.613 -2.075 C17 DDT 20
DDT C18 C18 C 0 1 Y N N N N N 15.177 37.743 30.756 -0.316 0.452 -1.915 C18 DDT 21
DDT C19 C19 C 0 1 Y N N N N N 14.791 37.605 32.104 -0.462 1.308 -0.841 C19 DDT 22
DDT S S S 0 1 N N N N N N 13.025 41.801 34.614 -0.205 -1.090 2.878 S DDT 23
DDT O1 O1 O 0 1 N N N N N N 11.765 42.019 35.352 0.554 -1.025 1.679 O1 DDT 24
DDT O2 O2 O 0 1 N N N N N N 14.222 42.562 35.067 -0.964 -2.211 3.311 O2 DDT 25
DDT N N N 0 1 N N N N N N 13.444 40.139 34.538 -1.273 0.173 2.803 N DDT 26
DDT OC1 OC1 O 0 1 N N N N N N 12.555 38.255 36.664 -0.192 3.369 3.742 OC1 DDT 27
DDT OC2 OC2 O 0 1 N N N N N N 10.679 39.312 36.033 -1.938 2.242 4.495 OC2 DDT 28
DDT O O O 0 1 N N N N N N 14.647 38.355 28.484 -1.052 -1.454 -3.134 O DDT 29
DDT "S'" S* S 0 1 N N N N N N 14.299 37.470 27.165 -1.893 -0.880 -4.265 "S'" DDT 30
DDT "O1'" O1* O 0 1 N N N N N N 14.287 38.293 25.981 -2.175 -1.972 -5.129 "O1'" DDT 31
DDT "O2'" O2* O 0 1 N N N N N N 13.095 36.614 27.359 -2.865 -0.052 -3.641 "O2'" DDT 32
DDT "C1'" C1* C 0 1 Y N N N N N 19.439 36.707 26.521 1.723 0.068 -7.865 "C1'" DDT 33
DDT "C2'" C2* C 0 1 Y N N N N N 19.546 38.097 26.391 1.767 -1.291 -8.084 "C2'" DDT 34
DDT "C3'" C3* C 0 1 Y N N N N N 18.421 38.944 26.475 0.954 -2.156 -7.357 "C3'" DDT 35
DDT "C4'" C4* C 0 1 Y N N N N N 17.183 38.392 26.725 0.094 -1.686 -6.413 "C4'" DDT 36
DDT C4X C4A* C 0 1 Y N N N N N 17.028 36.972 26.892 0.021 -0.306 -6.155 C4X DDT 37
DDT "C5'" C5* C 0 1 Y N N N N N 15.726 36.401 27.122 -0.860 0.207 -5.189 "C5'" DDT 38
DDT "C6'" C6* C 0 1 Y N N N N N 15.568 35.036 27.163 -0.909 1.550 -4.968 "C6'" DDT 39
DDT "C7'" C7* C 0 1 Y N N N N N 16.682 34.171 26.967 -0.100 2.425 -5.689 "C7'" DDT 40
DDT "C8'" C8* C 0 1 Y N N N N N 17.941 34.683 26.749 0.762 1.962 -6.636 "C8'" DDT 41
DDT C8X C8A* C 0 1 Y N N N N N 18.154 36.101 26.738 0.840 0.584 -6.891 C8X DDT 42
DDT "C9'" C9* C 0 1 N N N N N N 21.797 36.424 25.636 3.927 0.527 -8.319 "C9'" DDT 43
DDT "CA'" C10* C 0 1 N N N N N N 20.982 34.781 27.341 2.294 0.634 -10.016 "CA'" DDT 44
DDT "N1'" N1* N 0 1 N N N N N N 20.662 35.949 26.471 2.540 0.925 -8.598 "N1'" DDT 45
DDT HC2 HC2 H 0 1 N N N N N N 15.913 41.076 28.795 -0.743 -0.476 9.171 HC2 DDT 46
DDT HC3 HC3 H 0 1 N N N N N N 16.698 40.722 31.134 -2.336 -0.945 7.361 HC3 DDT 47
DDT HC4 HC4 H 0 1 N N N N N N 15.199 41.174 33.029 -1.595 -1.077 5.047 HC4 DDT 48
DDT HC6 HC6 H 0 1 N N N N N N 10.775 43.051 33.519 2.593 -0.616 2.889 HC6 DDT 49
DDT HC7 HC7 H 0 1 N N N N N N 10.042 43.598 31.192 4.199 -0.136 4.687 HC7 DDT 50
DDT HC8 HC8 H 0 1 N N N N N N 11.494 43.064 29.294 3.469 0.007 7.007 HC8 DDT 51
DDT HC91 1HC9 H 0 0 N N N N N N 12.598 40.382 27.107 2.055 1.419 10.384 HC91 DDT 52
DDT HC92 2HC9 H 0 0 N N N N N N 11.802 41.969 26.837 1.381 1.979 8.834 HC92 DDT 53
DDT HC93 3HC9 H 0 0 N N N N N N 11.699 41.175 28.445 0.374 1.025 9.950 HC93 DDT 54
DDT H101 1H10 H 0 0 N N N N N N 15.225 41.131 26.988 2.005 -2.089 9.467 H101 DDT 55
DDT H102 2H10 H 0 0 N N N N N N 15.230 42.928 26.983 2.277 -0.924 10.785 H102 DDT 56
DDT H103 3H10 H 0 0 N N N N N N 14.097 42.030 25.917 0.627 -1.221 10.187 H103 DDT 57
DDT HC11 HC11 H 0 0 N N N N N N 11.644 39.360 33.735 0.249 1.456 2.143 HC11 DDT 58
DDT H131 1H13 H 0 0 N N N N N N 12.192 36.927 33.943 -2.676 2.084 1.539 H131 DDT 59
DDT H132 2H13 H 0 0 N N N N N N 13.842 37.385 34.529 -1.274 3.025 0.975 H132 DDT 60
DDT HC15 HC15 H 0 0 N N N N N N 11.476 38.413 31.795 -3.136 -0.120 0.639 HC15 DDT 61
DDT HC16 HC16 H 0 0 N N N N N N 12.142 38.663 29.410 -2.888 -1.646 -1.275 HC16 DDT 62
DDT HC18 HC18 H 0 0 N N N N N N 16.203 37.576 30.462 0.476 0.613 -2.631 HC18 DDT 63
DDT HC19 HC19 H 0 0 N N N N N N 15.519 37.325 32.851 0.217 2.138 -0.716 HC19 DDT 64
DDT H H H 0 1 N N N N N N 13.955 39.958 35.379 -2.210 0.029 3.005 H DDT 65
DDT HXT HXT H 0 1 N N N N N N 10.446 39.197 36.947 -2.036 2.841 5.248 HXT DDT 66
DDT "H2'1" 1H2* H 0 0 N N N N N N 20.519 38.534 26.221 2.441 -1.690 -8.827 "H2'1" DDT 67
DDT "H3'1" 1H3* H 0 0 N N N N N N 18.528 40.011 26.345 1.006 -3.218 -7.546 "H3'1" DDT 68
DDT "H4'1" 1H4* H 0 0 N N N N N N 16.318 39.034 26.796 -0.529 -2.373 -5.860 "H4'1" DDT 69
DDT "H6'1" 1H6* H 0 0 N N N N N N 14.590 34.616 27.346 -1.585 1.942 -4.223 "H6'1" DDT 70
DDT "H7'1" 1H7* H 0 0 N N N N N N 16.537 33.101 26.990 -0.158 3.486 -5.495 "H7'1" DDT 71
DDT "H8'1" 1H8* H 0 0 N N N N N N 18.772 34.013 26.585 1.384 2.652 -7.188 "H8'1" DDT 72
DDT "H9'1" 1H9* H 0 0 N N N N N N 22.615 35.690 25.678 4.608 1.172 -8.873 "H9'1" DDT 73
DDT "H9'2" 2H9* H 0 0 N N N N N N 22.153 37.392 26.018 4.124 0.621 -7.252 "H9'2" DDT 74
DDT "H9'3" 3H9* H 0 0 N N N N N N 21.463 36.541 24.595 4.076 -0.507 -8.627 "H9'3" DDT 75
DDT HB1 1H** H 0 1 N N N N N N 20.183 34.649 28.086 2.914 1.283 -10.634 HB1 DDT 76
DDT HB2 2H** H 0 1 N N N N N N 21.938 34.958 27.856 2.541 -0.407 -10.221 HB2 DDT 77
DDT HB3 3H** H 0 1 N N N N N N 21.061 33.874 26.724 1.243 0.809 -10.246 HB3 DDT 78
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DDT C1 C2 DOUB Y N 1
DDT C1 C8A SING Y N 2
DDT C1 N1 SING N N 3
DDT C2 C3 SING Y N 4
DDT C2 HC2 SING N N 5
DDT C3 C4 DOUB Y N 6
DDT C3 HC3 SING N N 7
DDT C4 C4A SING Y N 8
DDT C4 HC4 SING N N 9
DDT C4A C5 DOUB Y N 10
DDT C4A C8A SING Y N 11
DDT C5 C6 SING Y N 12
DDT C5 S SING N N 13
DDT C6 C7 DOUB Y N 14
DDT C6 HC6 SING N N 15
DDT C7 C8 SING Y N 16
DDT C7 HC7 SING N N 17
DDT C8 C8A DOUB Y N 18
DDT C8 HC8 SING N N 19
DDT C9 N1 SING N N 20
DDT C9 HC91 SING N N 21
DDT C9 HC92 SING N N 22
DDT C9 HC93 SING N N 23
DDT C10 N1 SING N N 24
DDT C10 H101 SING N N 25
DDT C10 H102 SING N N 26
DDT C10 H103 SING N N 27
DDT C11 C12 SING N N 28
DDT C11 C13 SING N N 29
DDT C11 N SING N N 30
DDT C11 HC11 SING N N 31
DDT C12 OC1 DOUB N N 32
DDT C12 OC2 SING N N 33
DDT C13 C14 SING N N 34
DDT C13 H131 SING N N 35
DDT C13 H132 SING N N 36
DDT C14 C15 DOUB Y N 37
DDT C14 C19 SING Y N 38
DDT C15 C16 SING Y N 39
DDT C15 HC15 SING N N 40
DDT C16 C17 DOUB Y N 41
DDT C16 HC16 SING N N 42
DDT C17 C18 SING Y N 43
DDT C17 O SING N N 44
DDT C18 C19 DOUB Y N 45
DDT C18 HC18 SING N N 46
DDT C19 HC19 SING N N 47
DDT S O1 DOUB N N 48
DDT S O2 DOUB N N 49
DDT S N SING N N 50
DDT N H SING N N 51
DDT OC2 HXT SING N N 52
DDT O "S'" SING N N 53
DDT "S'" "O1'" DOUB N N 54
DDT "S'" "O2'" DOUB N N 55
DDT "S'" "C5'" SING N N 56
DDT "C1'" "C2'" DOUB Y N 57
DDT "C1'" C8X SING Y N 58
DDT "C1'" "N1'" SING N N 59
DDT "C2'" "C3'" SING Y N 60
DDT "C2'" "H2'1" SING N N 61
DDT "C3'" "C4'" DOUB Y N 62
DDT "C3'" "H3'1" SING N N 63
DDT "C4'" C4X SING Y N 64
DDT "C4'" "H4'1" SING N N 65
DDT C4X "C5'" DOUB Y N 66
DDT C4X C8X SING Y N 67
DDT "C5'" "C6'" SING Y N 68
DDT "C6'" "C7'" DOUB Y N 69
DDT "C6'" "H6'1" SING N N 70
DDT "C7'" "C8'" SING Y N 71
DDT "C7'" "H7'1" SING N N 72
DDT "C8'" C8X DOUB Y N 73
DDT "C8'" "H8'1" SING N N 74
DDT "C9'" "N1'" SING N N 75
DDT "C9'" "H9'1" SING N N 76
DDT "C9'" "H9'2" SING N N 77
DDT "C9'" "H9'3" SING N N 78
DDT "CA'" "N1'" SING N N 79
DDT "CA'" HB1 SING N N 80
DDT "CA'" HB2 SING N N 81
DDT "CA'" HB3 SING N N 82
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DDT SMILES ACDLabs 10.04 O=S(=O)(Oc1ccc(cc1)CC(C(=O)O)NS(=O)(=O)c3c2cccc(N(C)C)c2ccc3)c5c4cccc(N(C)C)c4ccc5
DDT SMILES_CANONICAL CACTVS 3.341 CN(C)c1cccc2c1cccc2[S](=O)(=O)N[C@@H](Cc3ccc(O[S](=O)(=O)c4cccc5c(cccc45)N(C)C)cc3)C(O)=O
DDT SMILES CACTVS 3.341 CN(C)c1cccc2c1cccc2[S](=O)(=O)N[CH](Cc3ccc(O[S](=O)(=O)c4cccc5c(cccc45)N(C)C)cc3)C(O)=O
DDT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CN(C)c1cccc2c1cccc2S(=O)(=O)N[C@@H](Cc3ccc(cc3)OS(=O)(=O)c4cccc5c4cccc5N(C)C)C(=O)O
DDT SMILES "OpenEye OEToolkits" 1.5.0 CN(C)c1cccc2c1cccc2S(=O)(=O)NC(Cc3ccc(cc3)OS(=O)(=O)c4cccc5c4cccc5N(C)C)C(=O)O
DDT InChI InChI 1.03 InChI=1S/C33H33N3O7S2/c1-35(2)29-13-5-11-26-24(29)9-7-15-31(26)44(39,40)34-28(33(37)38)21-22-17-19-23(20-18-22)43-45(41,42)32-16-8-10-25-27(32)12-6-14-30(25)36(3)4/h5-20,28,34H,21H2,1-4H3,(H,37,38)/t28-/m0/s1
DDT InChIKey InChI 1.03 LUBOPDUYHWABFG-NDEPHWFRSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DDT "SYSTEMATIC NAME" ACDLabs 10.04 N,O-bis{[5-(dimethylamino)naphthalen-1-yl]sulfonyl}-L-tyrosine
DDT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[(5-dimethylaminonaphthalen-1-yl)sulfonylamino]-3-[4-(5-dimethylaminonaphthalen-1-yl)sulfonyloxyphenyl]propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DDT 'Create component' 2001-07-08 RCSB
DDT 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id DDT
_pdbe_chem_comp_drugbank_details.drugbank_id DB03157
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name N,O-didansyl-L-tyrosine
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id DDT
_pdbe_chem_comp_synonyms.name N,O-didansyl-L-tyrosine
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id DDT
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03157
_pdbe_chem_comp_drugbank_classification.parent 'Phenylalanine and derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Carboxylic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenylalanine and derivatives. These are compounds containing phenylalanine or a derivative thereof resulting from reaction of phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
DDT DB03157 'Thymidylate synthase' Yeast P12461 unknown 1
DDT DB03157 'Thymidylate synthase' 'Escherichia coli (strain K12)' P0A884 unknown 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
DDT C1 C 16.134 8.677 1
DDT C2 C 17.493 7.906 2
DDT C3 C 17.493 6.344 3
DDT C4 C 16.134 5.573 4
DDT C4A C 14.793 6.375 5
DDT C5 C 13.494 5.625 6
DDT C6 C 12.195 6.375 7
DDT C7 C 12.195 7.875 8
DDT C8 C 13.494 8.625 9
DDT C8A C 14.793 7.875 10
DDT C9 C 17.407 10.942 11
DDT C10 C 14.809 10.912 12
DDT N1 N 16.117 10.177 13
DDT C11 C 12.195 1.875 14
DDT C12 C 10.896 2.625 15
DDT C13 C 12.195 0.375 16
DDT C14 C 10.896 -0.375 17
DDT C15 C 9.597 0.375 18
DDT C16 C 8.298 -0.375 19
DDT C17 C 8.298 -1.875 20
DDT C18 C 9.597 -2.625 21
DDT C19 C 10.896 -1.875 22
DDT S S 13.494 4.125 23
DDT O1 O 11.994 4.125 24
DDT O2 O 14.994 4.125 25
DDT N N 13.494 2.625 26
DDT OC1 O 9.597 1.875 27
DDT OC2 O 10.896 4.125 28
DDT O O 6.999 -2.625 29
DDT "S'" S 6.999 -4.125 30
DDT "O1'" O 5.499 -4.125 31
DDT "O2'" O 8.499 -4.125 32
DDT "C1'" C 4.359 -8.677 33
DDT "C2'" C 3.000 -7.906 34
DDT "C3'" C 3.000 -6.344 35
DDT "C4'" C 4.359 -5.573 36
DDT C4X C 5.700 -6.375 37
DDT "C5'" C 6.999 -5.625 38
DDT "C6'" C 8.298 -6.375 39
DDT "C7'" C 8.298 -7.875 40
DDT "C8'" C 6.999 -8.625 41
DDT C8X C 5.700 -7.875 42
DDT "C9'" C 3.086 -10.942 43
DDT "CA'" C 5.684 -10.912 44
DDT "N1'" N 4.376 -10.177 45
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
DDT C1 C2 DOUBLE NONE 1
DDT C1 C8A SINGLE NONE 2
DDT C1 N1 SINGLE NONE 3
DDT C2 C3 SINGLE NONE 4
DDT C3 C4 DOUBLE NONE 5
DDT C4 C4A SINGLE NONE 6
DDT C4A C5 SINGLE NONE 7
DDT C4A C8A DOUBLE NONE 8
DDT C5 C6 DOUBLE NONE 9
DDT C5 S SINGLE NONE 10
DDT C6 C7 SINGLE NONE 11
DDT C7 C8 DOUBLE NONE 12
DDT C8 C8A SINGLE NONE 13
DDT C9 N1 SINGLE NONE 14
DDT C10 N1 SINGLE NONE 15
DDT C11 C12 SINGLE NONE 16
DDT C11 C13 SINGLE BEGINWEDGE 17
DDT C11 N SINGLE NONE 18
DDT C12 OC1 DOUBLE NONE 19
DDT C12 OC2 SINGLE NONE 20
DDT C13 C14 SINGLE NONE 21
DDT C14 C15 DOUBLE NONE 22
DDT C14 C19 SINGLE NONE 23
DDT C15 C16 SINGLE NONE 24
DDT C16 C17 DOUBLE NONE 25
DDT C17 C18 SINGLE NONE 26
DDT C17 O SINGLE NONE 27
DDT C18 C19 DOUBLE NONE 28
DDT S O1 DOUBLE NONE 29
DDT S O2 DOUBLE NONE 30
DDT S N SINGLE NONE 31
DDT O "S'" SINGLE NONE 32
DDT "S'" "O1'" DOUBLE NONE 33
DDT "S'" "O2'" DOUBLE NONE 34
DDT "S'" "C5'" SINGLE NONE 35
DDT "C1'" "C2'" DOUBLE NONE 36
DDT "C1'" C8X SINGLE NONE 37
DDT "C1'" "N1'" SINGLE NONE 38
DDT "C2'" "C3'" SINGLE NONE 39
DDT "C3'" "C4'" DOUBLE NONE 40
DDT "C4'" C4X SINGLE NONE 41
DDT C4X "C5'" SINGLE NONE 42
DDT C4X C8X DOUBLE NONE 43
DDT "C5'" "C6'" DOUBLE NONE 44
DDT "C6'" "C7'" SINGLE NONE 45
DDT "C7'" "C8'" DOUBLE NONE 46
DDT "C8'" C8X SINGLE NONE 47
DDT "C9'" "N1'" SINGLE NONE 48
DDT "CA'" "N1'" SINGLE NONE 49
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
DDT MurckoScaffold S1 scaffold O=S(=O)(NCCc1ccc(OS(=O)(=O)c2cccc3ccccc23)cc1)c1cccc2ccccc12 InChI=1S/C28H23NO5S2/c30-35(31,27-13-5-9-22-7-1-3-11-25(22)27)29-20-19-21-15-17-24(18-16-21)34-36(32,33)28-14-6-10-23-8-2-4-12-26(23)28/h1-18,29H,19-20H2 OFXXYMCGRZSANI-UHFFFAOYSA-N
DDT napthalene F1 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
DDT peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
DDT phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
DDT Z45617795 F4 fragment CS(=O)(=O)NCCc1ccccc1 InChI=1S/C9H13NO2S/c1-13(11,12)10-8-7-9-5-3-2-4-6-9/h2-6,10H,7-8H2,1H3 JGDDFCYMSLNOGJ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
DDT C1 S1 1
DDT C2 S1 1
DDT C3 S1 1
DDT C4 S1 1
DDT C4A S1 1
DDT C5 S1 1
DDT C6 S1 1
DDT C7 S1 1
DDT C8 S1 1
DDT C8A S1 1
DDT C11 S1 1
DDT C13 S1 1
DDT C14 S1 1
DDT C15 S1 1
DDT C16 S1 1
DDT C17 S1 1
DDT C18 S1 1
DDT C19 S1 1
DDT S S1 1
DDT O1 S1 1
DDT O2 S1 1
DDT N S1 1
DDT O S1 1
DDT "S'" S1 1
DDT "O1'" S1 1
DDT "O2'" S1 1
DDT "C1'" S1 1
DDT "C2'" S1 1
DDT "C3'" S1 1
DDT "C4'" S1 1
DDT C4X S1 1
DDT "C5'" S1 1
DDT "C6'" S1 1
DDT "C7'" S1 1
DDT "C8'" S1 1
DDT C8X S1 1
DDT C2 F1 1
DDT C3 F1 1
DDT C4 F1 1
DDT C4A F1 1
DDT C8A F1 1
DDT C1 F1 1
DDT C8 F1 1
DDT C7 F1 1
DDT C6 F1 1
DDT C5 F1 1
DDT "C2'" F1 2
DDT "C3'" F1 2
DDT "C4'" F1 2
DDT C4X F1 2
DDT C8X F1 2
DDT "C1'" F1 2
DDT "C8'" F1 2
DDT "C7'" F1 2
DDT "C6'" F1 2
DDT "C5'" F1 2
DDT OC1 F2 1
DDT C12 F2 1
DDT C11 F2 1
DDT N F2 1
DDT C1 F3 1
DDT C2 F3 1
DDT C3 F3 1
DDT C4 F3 1
DDT C4A F3 1
DDT C8A F3 1
DDT C4A F3 2
DDT C5 F3 2
DDT C6 F3 2
DDT C7 F3 2
DDT C8 F3 2
DDT C8A F3 2
DDT C14 F3 3
DDT C15 F3 3
DDT C16 F3 3
DDT C17 F3 3
DDT C18 F3 3
DDT C19 F3 3
DDT "C1'" F3 4
DDT "C2'" F3 4
DDT "C3'" F3 4
DDT "C4'" F3 4
DDT C4X F3 4
DDT C8X F3 4
DDT C4X F3 5
DDT "C5'" F3 5
DDT "C6'" F3 5
DDT "C7'" F3 5
DDT "C8'" F3 5
DDT C8X F3 5
DDT C5 F4 1
DDT S F4 1
DDT O1 F4 1
DDT O2 F4 1
DDT N F4 1
DDT C11 F4 1
DDT C13 F4 1
DDT C14 F4 1
DDT C15 F4 1
DDT C16 F4 1
DDT C17 F4 1
DDT C18 F4 1
DDT C19 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id DDT
_pdbe_chem_comp_rdkit_properties.exactmw 647.176
_pdbe_chem_comp_rdkit_properties.amw 647.775
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 15
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 45
_pdbe_chem_comp_rdkit_properties.NumAtoms 78
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.182
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 308.706
_pdbe_chem_comp_rdkit_properties.tpsa 133.320
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.516
_pdbe_chem_comp_rdkit_properties.CrippenMR 170.459
_pdbe_chem_comp_rdkit_properties.chi0v 23.149
_pdbe_chem_comp_rdkit_properties.chi1v 14.200
_pdbe_chem_comp_rdkit_properties.chi2v 7.727
_pdbe_chem_comp_rdkit_properties.chi3v 7.727
_pdbe_chem_comp_rdkit_properties.chi4v 5.479
_pdbe_chem_comp_rdkit_properties.chi0n 54.516
_pdbe_chem_comp_rdkit_properties.chi1n 27.707
_pdbe_chem_comp_rdkit_properties.chi2n 5.290
_pdbe_chem_comp_rdkit_properties.chi3n 5.290
_pdbe_chem_comp_rdkit_properties.chi4n 3.471
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.650
_pdbe_chem_comp_rdkit_properties.kappa1 10.443
_pdbe_chem_comp_rdkit_properties.kappa2 12.388
_pdbe_chem_comp_rdkit_properties.kappa3 6.578
_pdbe_chem_comp_rdkit_properties.Phi 2.875
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
DDT UniChem DrugBank DB03157
DDT UniChem ZINC ZINC000024640039
DDT UniChem SureChEMBL SCHEMBL4325460
DDT UniChem BindingDb 50161779
DDT UniChem BRENDA 666
DDT UniChem 'Probes And Drugs' PD059842
DDT UniChem PubChem 446468
DDT UniChem 'PubChem TPHARMA' 47214396
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
DDT C1 2.569 0.020 -1.781 ETKDGv3 1
DDT C2 2.392 -0.926 -2.717 ETKDGv3 2
DDT C3 2.945 -2.277 -2.525 ETKDGv3 3
DDT C4 3.587 -2.589 -1.395 ETKDGv3 4
DDT C4A 3.782 -1.568 -0.332 ETKDGv3 5
DDT C5 4.402 -1.914 0.986 ETKDGv3 6
DDT C6 4.676 -0.930 1.860 ETKDGv3 7
DDT C7 4.326 0.468 1.553 ETKDGv3 8
DDT C8 3.674 0.765 0.427 ETKDGv3 9
DDT C8A 3.352 -0.300 -0.553 ETKDGv3 10
DDT C9 0.799 1.616 -1.005 ETKDGv3 11
DDT C10 2.207 2.165 -3.037 ETKDGv3 12
DDT N1 1.900 1.285 -1.910 ETKDGv3 13
DDT C11 2.064 -3.687 2.271 ETKDGv3 14
DDT C12 1.394 -4.587 3.268 ETKDGv3 15
DDT C13 1.011 -3.110 1.294 ETKDGv3 16
DDT C14 0.128 -2.066 1.934 ETKDGv3 17
DDT C15 -1.203 -2.240 2.007 ETKDGv3 18
DDT C16 -2.068 -1.167 2.539 ETKDGv3 19
DDT C17 -1.532 -0.005 2.959 ETKDGv3 20
DDT C18 -0.066 0.173 2.906 ETKDGv3 21
DDT C19 0.717 -0.791 2.410 ETKDGv3 22
DDT S 4.626 -3.601 1.494 ETKDGv3 23
DDT O1 5.246 -3.647 2.863 ETKDGv3 24
DDT O2 5.556 -4.292 0.537 ETKDGv3 25
DDT N 3.105 -4.454 1.555 ETKDGv3 26
DDT OC1 1.022 -5.744 2.932 ETKDGv3 27
DDT OC2 1.145 -4.126 4.557 ETKDGv3 28
DDT O -2.309 1.058 3.440 ETKDGv3 29
DDT "S'" -3.962 1.285 3.063 ETKDGv3 30
DDT "O1'" -4.412 2.628 3.564 ETKDGv3 31
DDT "O2'" -4.780 0.221 3.742 ETKDGv3 32
DDT "C1'" -2.755 2.914 -1.853 ETKDGv3 33
DDT "C2'" -1.928 3.834 -1.333 ETKDGv3 34
DDT "C3'" -1.775 3.959 0.126 ETKDGv3 35
DDT "C4'" -2.461 3.158 0.947 ETKDGv3 36
DDT C4X -3.386 2.128 0.401 ETKDGv3 37
DDT "C5'" -4.161 1.219 1.305 ETKDGv3 38
DDT "C6'" -4.987 0.304 0.769 ETKDGv3 39
DDT "C7'" -5.123 0.180 -0.692 ETKDGv3 40
DDT "C8'" -4.428 0.979 -1.504 ETKDGv3 41
DDT C8X -3.524 2.014 -0.945 ETKDGv3 42
DDT "C9'" -4.089 3.325 -3.939 ETKDGv3 43
DDT "CA'" -1.781 2.287 -4.072 ETKDGv3 44
DDT "N1'" -2.891 2.809 -3.278 ETKDGv3 45
DDT HC2 1.797 -0.724 -3.599 ETKDGv3 46
DDT HC3 2.805 -3.026 -3.294 ETKDGv3 47
DDT HC4 3.966 -3.593 -1.281 ETKDGv3 48
DDT HC6 5.107 -1.146 2.828 ETKDGv3 49
DDT HC7 4.563 1.249 2.264 ETKDGv3 50
DDT HC8 3.405 1.794 0.230 ETKDGv3 51
DDT HC91 0.776 0.930 -0.132 ETKDGv3 52
DDT HC92 -0.164 1.521 -1.546 ETKDGv3 53
DDT HC93 0.914 2.655 -0.631 ETKDGv3 54
DDT H101 1.607 3.099 -2.985 ETKDGv3 55
DDT H102 1.978 1.655 -3.995 ETKDGv3 56
DDT H103 3.284 2.437 -3.014 ETKDGv3 57
DDT HC11 2.524 -2.854 2.848 ETKDGv3 58
DDT H131 0.406 -3.940 0.865 ETKDGv3 59
DDT H132 1.512 -2.627 0.437 ETKDGv3 60
DDT HC15 -1.664 -3.154 1.653 ETKDGv3 61
DDT HC16 -3.133 -1.342 2.574 ETKDGv3 62
DDT HC18 0.374 1.102 3.246 ETKDGv3 63
DDT HC19 1.783 -0.630 2.352 ETKDGv3 64
DDT H 2.811 -4.681 0.577 ETKDGv3 65
DDT HXT 0.678 -4.714 5.238 ETKDGv3 66
DDT "H2'1" -1.367 4.496 -1.981 ETKDGv3 67
DDT "H3'1" -1.103 4.704 0.531 ETKDGv3 68
DDT "H4'1" -2.326 3.281 2.011 ETKDGv3 69
DDT "H6'1" -5.551 -0.372 1.398 ETKDGv3 70
DDT "H7'1" -5.782 -0.573 -1.106 ETKDGv3 71
DDT "H8'1" -4.532 0.857 -2.574 ETKDGv3 72
DDT "H9'1" -4.864 3.607 -3.194 ETKDGv3 73
DDT "H9'2" -4.512 2.548 -4.610 ETKDGv3 74
DDT "H9'3" -3.827 4.223 -4.537 ETKDGv3 75
DDT HB1 -0.875 2.909 -3.916 ETKDGv3 76
DDT HB2 -2.029 2.293 -5.155 ETKDGv3 77
DDT HB3 -1.563 1.242 -3.766 ETKDGv3 78
#