Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D7J    

Bonds between two atoms of the molecule

Total Number of Bonds: 73


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C24 C21 C C sing 1.53 N N
2 O19 C18 O C doub 1.22 N N
3 C14 C13 C C doub 1.38 N Y
4 C14 C15 C C sing 1.38 N Y
5 C23 C21 C C sing 1.53 N N
6 C13 C12 C C sing 1.38 N Y
7 C21 C22 C C sing 1.53 N N
8 C21 O20 C O sing 1.45 N N
9 C18 O20 C O sing 1.35 N N
10 C18 N17 C N sing 1.35 N N
11 C15 C16 C C doub 1.38 N Y
12 C12 C11 C C doub 1.38 N Y
13 C16 C11 C C sing 1.38 N Y
14 C11 C10 C C sing 1.51 N N
15 N17 C09 N C sing 1.46 N N
16 C10 C09 C C sing 1.53 N N
17 C09 C08 C C sing 1.53 N N
18 C32 C31 C C doub 1.38 N Y
19 C32 N33 C N sing 1.32 N Y
20 C31 C30 C C sing 1.39 N Y
21 C08 S07 C S sing 1.81 N N
22 N33 C34 N C doub 1.32 N Y
23 C30 C29 C C doub 1.39 N Y
24 S07 C06 S C sing 1.81 N N
25 C34 C29 C C sing 1.38 N Y
26 C29 C28 C C sing 1.51 N N
27 C05 C06 C C sing 1.53 N N
28 C05 N04 C N sing 1.47 N N
29 C05 C25 C C sing 1.51 N N
30 N27 C28 N C sing 1.47 N N
31 N27 C25 N C sing 1.35 N N
32 N04 C02 N C sing 1.47 N N
33 C25 O26 C O doub 1.21 N N
34 C01 C02 C C sing 1.53 N N
35 C02 C03 C C sing 1.53 N N
36 C01 H1 C H sing 1.09 N N
37 C01 H2 C H sing 1.09 N N
38 C01 H3 C H sing 1.09 N N
39 C02 H4 C H sing 1.09 N N
40 C03 H5 C H sing 1.09 N N
41 C03 H6 C H sing 1.09 N N
42 C03 H7 C H sing 1.09 N N
43 C05 H8 C H sing 1.09 N N
44 C06 H9 C H sing 1.09 N N
45 C06 H10 C H sing 1.09 N N
46 C08 H11 C H sing 1.09 N N
47 C08 H12 C H sing 1.09 N N
48 C09 H13 C H sing 1.09 N N
49 C10 H14 C H sing 1.09 N N
50 C10 H15 C H sing 1.09 N N
51 C12 H16 C H sing 1.08 N N
52 C13 H17 C H sing 1.08 N N
53 C14 H18 C H sing 1.08 N N
54 C15 H19 C H sing 1.08 N N
55 C16 H20 C H sing 1.08 N N
56 C22 H21 C H sing 1.09 N N
57 C22 H22 C H sing 1.09 N N
58 C22 H23 C H sing 1.09 N N
59 C23 H24 C H sing 1.09 N N
60 C23 H25 C H sing 1.09 N N
61 C23 H26 C H sing 1.09 N N
62 C24 H27 C H sing 1.09 N N
63 C24 H28 C H sing 1.09 N N
64 C24 H29 C H sing 1.09 N N
65 C28 H30 C H sing 1.09 N N
66 C28 H31 C H sing 1.09 N N
67 C30 H32 C H sing 1.08 N N
68 C31 H33 C H sing 1.08 N N
69 C32 H34 C H sing 1.08 N N
70 C34 H35 C H sing 1.08 N N
71 N04 H36 N H sing 1.01 N N
72 N17 H38 N H sing 0.97 N N
73 N27 H39 N H sing 0.97 N N