Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D6A    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C8 C9 C C sing 1.55 N N
2 C8 N2 C N sing 1.49 N N
3 C8 C7 C C sing 1.51 N N
4 C9 C10 C C sing 1.55 N N
5 N2 C11 N C sing 1.48 N N
6 C7 O C O sing 1.34 N Y
7 C7 N C N doub 1.31 N Y
8 O N1 O N sing 1.21 N Y
9 N C6 N C sing 1.35 N Y
10 C11 C10 C C sing 1.54 N N
11 C10 O1 C O sing 1.43 N N
12 N1 C6 N C doub 1.31 N Y
13 C6 C5 C C sing 1.48 N N
14 F2 C12 F C sing 1.4 N N
15 C5 C4 C C doub 1.39 N Y
16 C5 C C C sing 1.39 N Y
17 C4 C3 C C sing 1.38 N Y
18 C C1 C C doub 1.38 N Y
19 C1 C2 C C sing 1.38 N Y
20 C3 C2 C C doub 1.38 N Y
21 C2 C12 C C sing 1.51 N N
22 C12 F C F sing 1.4 N N
23 C12 F1 C F sing 1.4 N N
24 C4 H1 C H sing 1.08 N N
25 C8 H2 C H sing 1.09 N N
26 N2 H3 N H sing 1.01 N N
27 C9 H5 C H sing 1.09 N N
28 C9 H6 C H sing 1.09 N N
29 C10 H7 C H sing 1.09 N N
30 C11 H8 C H sing 1.09 N N
31 C11 H9 C H sing 1.09 N N
32 C1 H10 C H sing 1.08 N N
33 C3 H11 C H sing 1.08 N N
34 C H12 C H sing 1.08 N N
35 O1 H13 O H sing 0.97 N N