Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D60    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C9 N2 C N doub 1.31 N Y
2 C9 C1 C C sing 1.41 N Y
3 N2 N1 N N sing 1.4 N Y
4 C7 C5 C C doub 1.36 N Y
5 C7 C2 C C sing 1.4 N Y
6 C5 C3 C C sing 1.4 N Y
7 C1 C2 C C sing 1.48 N N
8 C1 C8 C C doub 1.37 N Y
9 C2 C6 C C doub 1.4 N Y
10 N1 C10 N C sing 1.46 N N
11 N1 C8 N C sing 1.35 N Y
12 O1 C11 O C doub 1.22 N N
13 C3 C11 C C sing 1.47 N N
14 C3 C4 C C doub 1.4 N Y
15 C11 O2 C O sing 1.35 N N
16 C6 C4 C C sing 1.38 N Y
17 C4 C12 C C sing 1.51 N N
18 C12 C13 C C sing 1.53 N N
19 F2 C16 F C sing 1.35 N N
20 C16 C17 C C doub 1.38 N Y
21 C16 C15 C C sing 1.4 N Y
22 C17 C18 C C sing 1.4 N Y
23 C22 N3 C N sing 1.35 N Y
24 C22 C21 C C doub 1.37 N Y
25 C13 C14 C C sing 1.51 N N
26 O3 C14 O C doub 1.21 N N
27 C14 C15 C C sing 1.47 N N
28 N3 N4 N N sing 1.4 N Y
29 C15 C19 C C doub 1.4 N Y
30 C18 C21 C C sing 1.48 N N
31 C18 C20 C C doub 1.4 N Y
32 C21 C23 C C sing 1.41 N Y
33 C19 C20 C C sing 1.38 N Y
34 C19 F1 C F sing 1.35 N N
35 N4 C23 N C doub 1.31 N Y
36 C10 H1 C H sing 1.09 N N
37 C10 H2 C H sing 1.09 N N
38 C10 H3 C H sing 1.09 N N
39 C8 H4 C H sing 1.08 N N
40 C9 H5 C H sing 1.08 N N
41 C6 H6 C H sing 1.08 N N
42 C7 H7 C H sing 1.08 N N
43 C5 H8 C H sing 1.08 N N
44 O2 H9 O H sing 0.97 N N
45 C12 H10 C H sing 1.09 N N
46 C12 H11 C H sing 1.09 N N
47 C13 H12 C H sing 1.09 N N
48 C13 H13 C H sing 1.09 N N
49 C20 H14 C H sing 1.08 N N
50 C17 H15 C H sing 1.08 N N
51 C22 H16 C H sing 1.08 N N
52 N3 H17 N H sing 0.97 N N
53 C23 H18 C H sing 1.08 N N