Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D3K    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C16 C17 C C doub 1.38 N Y
2 C16 C15 C C sing 1.38 N Y
3 C17 C18 C C sing 1.38 N Y
4 C15 C14 C C doub 1.38 N Y
5 C18 C13 C C doub 1.38 N Y
6 C14 C13 C C sing 1.38 N Y
7 C13 C12 C C sing 1.51 N N
8 C10 C09 C C doub 1.38 N Y
9 C10 C11 C C sing 1.38 N Y
10 C12 C11 C C sing 1.51 N N
11 C12 C19 C C sing 1.53 N N
12 C09 C08 C C sing 1.38 N Y
13 C11 C06 C C doub 1.39 N Y
14 C08 C07 C C doub 1.38 N Y
15 C06 C07 C C sing 1.39 N Y
16 C06 O05 C O sing 1.36 N N
17 C19 N20 C N sing 1.48 N N
18 C19 C23 C C sing 1.55 N N
19 O05 C04 O C sing 1.43 N N
20 N20 C21 N C sing 1.47 N N
21 C01 O02 C O sing 1.43 N N
22 C03 C04 C C sing 1.53 N N
23 C03 O02 C O sing 1.43 N N
24 C23 C22 C C sing 1.55 N N
25 C21 C22 C C sing 1.54 N N
26 C14 H1 C H sing 1.08 N N
27 C10 H2 C H sing 1.08 N N
28 C12 H3 C H sing 1.09 N N
29 C01 H4 C H sing 1.09 N N
30 C01 H5 C H sing 1.09 N N
31 C01 H6 C H sing 1.09 N N
32 C03 H7 C H sing 1.09 N N
33 C03 H8 C H sing 1.09 N N
34 C04 H9 C H sing 1.09 N N
35 C04 H10 C H sing 1.09 N N
36 C07 H11 C H sing 1.08 N N
37 C08 H12 C H sing 1.08 N N
38 C09 H13 C H sing 1.08 N N
39 C15 H14 C H sing 1.08 N N
40 C16 H15 C H sing 1.08 N N
41 C17 H16 C H sing 1.08 N N
42 C18 H17 C H sing 1.08 N N
43 C19 H18 C H sing 1.09 N N
44 C21 H19 C H sing 1.09 N N
45 C21 H20 C H sing 1.09 N N
46 C22 H21 C H sing 1.09 N N
47 C22 H22 C H sing 1.09 N N
48 C23 H23 C H sing 1.09 N N
49 C23 H24 C H sing 1.09 N N
50 N20 H25 N H sing 1.01 N N