Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : CQ5    

Bonds between two atoms of the molecule

Total Number of Bonds: 74


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C25 C18 C C sing 1.53 N N
2 C18 C17 C C sing 1.53 N N
3 C18 C19 C C sing 1.51 N N
4 C17 C16 C C sing 1.51 N N
5 C24 C19 C C doub 1.38 N Y
6 C24 C23 C C sing 1.38 N Y
7 C19 C20 C C sing 1.38 N Y
8 C23 C22 C C doub 1.38 N Y
9 C20 C21 C C doub 1.38 N Y
10 C16 O2 C O doub 1.21 N N
11 C16 N4 C N sing 1.35 N N
12 C8 C9 C C sing 1.55 N N
13 C8 N3 C N sing 1.48 N N
14 C22 C21 C C sing 1.38 N Y
15 C9 C10 C C sing 1.55 N N
16 C13 N4 C N sing 1.47 N N
17 C13 C12 C C sing 1.53 N N
18 N4 C14 N C sing 1.47 N N
19 C10 C11 C C sing 1.54 N N
20 C7 N3 C N sing 1.47 N N
21 C7 C6 C C sing 1.53 N N
22 N3 C11 N C sing 1.47 N N
23 C12 C5 C C sing 1.53 N N
24 O C3 O C doub 1.22 N N
25 C14 C15 C C sing 1.53 N N
26 C6 N2 C N sing 1.46 N N
27 C C3 C C sing 1.4 N N
28 C C1 C C doub 1.39 N N
29 C3 N1 C N sing 1.35 N N
30 C5 C15 C C sing 1.53 N N
31 C5 O1 C O sing 1.43 N N
32 C5 C4 C C sing 1.53 N N
33 C1 N2 C N sing 1.38 N N
34 C1 N C N sing 1.34 N N
35 N1 C4 N C sing 1.47 N N
36 N1 C2 N C sing 1.35 N N
37 C2 N C N doub 1.3 N N
38 C H1 C H sing 1.08 N N
39 C17 H2 C H sing 1.09 N N
40 C17 H3 C H sing 1.09 N N
41 C18 H4 C H sing 1.09 N N
42 C25 H5 C H sing 1.09 N N
43 C25 H6 C H sing 1.09 N N
44 C25 H7 C H sing 1.09 N N
45 C24 H8 C H sing 1.08 N N
46 C23 H9 C H sing 1.08 N N
47 C22 H10 C H sing 1.08 N N
48 C21 H11 C H sing 1.08 N N
49 C20 H12 C H sing 1.08 N N
50 C13 H13 C H sing 1.09 N N
51 C13 H14 C H sing 1.09 N N
52 C12 H15 C H sing 1.09 N N
53 C12 H16 C H sing 1.09 N N
54 C14 H17 C H sing 1.09 N N
55 C14 H18 C H sing 1.09 N N
56 C15 H19 C H sing 1.09 N N
57 C15 H20 C H sing 1.09 N N
58 O1 H21 O H sing 0.97 N N
59 C4 H22 C H sing 1.09 N N
60 C4 H23 C H sing 1.09 N N
61 C2 H24 C H sing 1.08 N N
62 N2 H25 N H sing 0.97 N N
63 C6 H26 C H sing 1.09 N N
64 C6 H27 C H sing 1.09 N N
65 C7 H28 C H sing 1.09 N N
66 C7 H29 C H sing 1.09 N N
67 C11 H31 C H sing 1.09 N N
68 C11 H32 C H sing 1.09 N N
69 C10 H33 C H sing 1.09 N N
70 C10 H34 C H sing 1.09 N N
71 C9 H35 C H sing 1.09 N N
72 C9 H36 C H sing 1.09 N N
73 C8 H37 C H sing 1.09 N N
74 C8 H38 C H sing 1.09 N N