Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : CM4    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.53 N N
2 C1 C11 C C sing 1.53 N N
3 C1 C13 C C sing 1.51 N N
4 C1 H1 C H sing 1.09 N N
5 C2 O3 C O sing 1.42 N N
6 C2 C20 C C sing 1.51 N N
7 C2 H2 C H sing 1.09 N N
8 O3 C4 O C sing 1.35 N N
9 C4 C5 C C doub 1.4 N Y
10 C4 C10 C C sing 1.38 N Y
11 C5 C6 C C sing 1.38 N Y
12 C5 H5 C H sing 1.08 N N
13 C6 C7 C C doub 1.39 N Y
14 C6 H6 C H sing 1.08 N N
15 C7 O8 C O sing 1.36 N N
16 C7 C9 C C sing 1.38 N Y
17 O8 HO8 O H sing 0.97 N N
18 C9 C10 C C doub 1.39 N Y
19 C9 H9 C H sing 1.08 N N
20 C10 C11 C C sing 1.51 N N
21 C11 C12 C C sing 1.53 N N
22 C11 H11 C H sing 1.09 N N
23 C12 H121 C H sing 1.09 N N
24 C12 H122 C H sing 1.09 N N
25 C12 H123 C H sing 1.09 N N
26 C13 C14 C C doub 1.38 N Y
27 C13 C19 C C sing 1.38 N Y
28 C14 C15 C C sing 1.38 N Y
29 C14 H14 C H sing 1.08 N N
30 C15 C16 C C doub 1.39 N Y
31 C15 H15 C H sing 1.08 N N
32 C16 O17 C O sing 1.36 N N
33 C16 C18 C C sing 1.39 N Y
34 O17 H17 O H sing 0.97 N N
35 C18 C19 C C doub 1.38 N Y
36 C18 H18 C H sing 1.08 N N
37 C19 H19 C H sing 1.08 N N
38 C20 C21 C C doub 1.38 N Y
39 C20 C25 C C sing 1.38 N Y
40 C21 C22 C C sing 1.38 N Y
41 C21 H21 C H sing 1.08 N N
42 C22 C23 C C doub 1.39 N Y
43 C22 H22 C H sing 1.08 N N
44 C23 C24 C C sing 1.39 N Y
45 C23 O26 C O sing 1.36 N N
46 C24 C25 C C doub 1.38 N Y
47 C24 H24 C H sing 1.08 N N
48 C25 H25 C H sing 1.08 N N
49 O26 C27 O C sing 1.43 N N
50 C27 C28 C C sing 1.53 N N
51 C27 H271 C H sing 1.09 N N
52 C27 H272 C H sing 1.09 N N
53 C28 N29 C N sing 1.47 N N
54 C28 H281 C H sing 1.09 N N
55 C28 H282 C H sing 1.09 N N
56 N29 C30 N C sing 1.48 N N
57 N29 C33 N C sing 1.47 N N
58 C30 C31 C C sing 1.55 N N
59 C30 H301 C H sing 1.09 N N
60 C30 H302 C H sing 1.09 N N
61 C31 C32 C C sing 1.55 N N
62 C31 H311 C H sing 1.09 N N
63 C31 H312 C H sing 1.09 N N
64 C32 C33 C C sing 1.54 N N
65 C32 H321 C H sing 1.09 N N
66 C32 H322 C H sing 1.09 N N
67 C33 H331 C H sing 1.09 N N
68 C33 H332 C H sing 1.09 N N