Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : C9I    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAY CAZ C C doub 1.36 N Y
2 CAY CAX C C sing 1.41 N Y
3 CBE CAX C C doub 1.4 N Y
4 CBE CBD C C sing 1.36 N Y
5 CAZ CBA C C sing 1.39 N Y
6 CAX CAW C C sing 1.42 N Y
7 CBD CBC C C doub 1.39 N Y
8 CBA CAS C C doub 1.36 N Y
9 CBC CBB C C sing 1.36 N Y
10 CAW CAS C C sing 1.41 N Y
11 CAW CBB C C doub 1.41 N Y
12 CAS CAR C C sing 1.51 N N
13 CAU CAR C C sing 1.53 N N
14 CAU CAV C C sing 1.53 N N
15 CAR NAQ C N sing 1.47 N N
16 OAO CAN O C doub 1.21 N N
17 NAQ CAP N C sing 1.35 N N
18 OAM CAN O C sing 1.34 N N
19 OAM CAL O C sing 1.46 N N
20 CAN NAH C N sing 1.34 N N
21 CAP OAT C O doub 1.21 N N
22 CAP CAL C C sing 1.51 N N
23 CAL CAK C C sing 1.54 N N
24 NAH CAE N C sing 1.4 N N
25 NAH CAK N C sing 1.47 N N
26 CAF CAE C C doub 1.39 N Y
27 CAF CAA C C sing 1.38 N Y
28 CAE CAD C C sing 1.39 N Y
29 CAA CAB C C doub 1.39 N Y
30 CAD NAC C N doub 1.31 N Y
31 NAI CAG N C doub 1.3 N N
32 CAB NAC C N sing 1.33 N Y
33 CAB CAG C C sing 1.48 N N
34 CAG NAJ C N sing 1.38 N N
35 CAA H1 C H sing 1.08 N N
36 CAD H2 C H sing 1.08 N N
37 CAF H3 C H sing 1.08 N N
38 CAK H4 C H sing 1.09 N N
39 CAK H5 C H sing 1.09 N N
40 CAL H6 C H sing 1.09 N N
41 CAR H7 C H sing 1.09 N N
42 CAU H8 C H sing 1.09 N N
43 CAU H9 C H sing 1.09 N N
44 CAV H10 C H sing 1.09 N N
45 CAV H11 C H sing 1.09 N N
46 CAV H12 C H sing 1.09 N N
47 CAY H13 C H sing 1.08 N N
48 CAZ H14 C H sing 1.08 N N
49 CBA H15 C H sing 1.08 N N
50 CBB H16 C H sing 1.08 N N
51 CBC H17 C H sing 1.08 N N
52 CBD H18 C H sing 1.08 N N
53 CBE H19 C H sing 1.08 N N
54 NAI H20 N H sing 0.97 N N
55 NAJ H21 N H sing 0.97 N N
56 NAJ H22 N H sing 0.97 N N
57 NAQ H23 N H sing 0.97 N N