data_C9I
#
_chem_comp.id C9I
_chem_comp.name
(5~{R})-3-(6-carbamimidoylpyridin-3-yl)-~{N}-[(1~{S})-1-naphthalen-1-ylpropyl]-2-oxidanylidene-1,3-oxazolidine-5-carboxamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H23 N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-12-14
_chem_comp.pdbx_modified_date 2022-11-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 417.460
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code C9I
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7QI0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C9I CAA C1 C 0 1 Y N N N N N 12.302 9.847 -1.770 5.960 0.649 -0.844 CAA C9I 1
C9I CAB C2 C 0 1 Y N N N N N 12.810 9.611 -0.495 6.273 -0.529 -0.169 CAB C9I 2
C9I CAD C3 C 0 1 Y N N N N N 11.799 7.408 -0.602 4.153 -0.656 0.734 CAD C9I 3
C9I CAE C4 C 0 1 Y N N N N N 11.273 7.671 -1.874 3.773 0.523 0.099 CAE C9I 4
C9I CAF C5 C 0 1 Y N N N N N 11.516 8.902 -2.443 4.693 1.187 -0.710 CAF C9I 5
C9I CAG C6 C 0 1 N N N N N N 13.570 10.636 0.150 7.628 -1.111 -0.299 CAG C9I 6
C9I CAK C7 C 0 1 N N N N N N 10.382 5.379 -1.849 1.417 0.413 1.068 CAK C9I 7
C9I CAL C8 C 0 1 N N R N N N 9.546 4.617 -2.936 0.219 1.366 0.892 CAL C9I 8
C9I CAN C9 C 0 1 N N N N N N 9.908 6.803 -3.697 2.006 2.148 -0.303 CAN C9I 9
C9I CAP C10 C 0 1 N N N N N N 10.342 3.460 -3.586 -0.939 0.646 0.251 CAP C9I 10
C9I CAR C11 C 0 1 N N S N N N 10.271 1.364 -4.897 -2.676 -1.063 0.281 CAR C9I 11
C9I CAS C12 C 0 1 Y N N N N N 10.978 1.861 -6.073 -3.953 -0.319 0.574 CAS C9I 12
C9I CAU C13 C 0 1 N N N N N N 9.209 0.302 -5.235 -2.770 -2.482 0.846 CAU C9I 13
C9I CAV C14 C 0 1 N N N N N N 8.713 -0.433 -3.956 -1.527 -3.276 0.442 CAV C9I 14
C9I CAW C15 C 0 1 Y N N N N N 12.155 1.283 -6.618 -5.046 -0.418 -0.305 CAW C9I 15
C9I CAX C16 C 0 1 Y N N N N N 12.799 1.854 -7.773 -6.239 0.288 -0.012 CAX C9I 16
C9I CAY C17 C 0 1 Y N N N N N 12.325 3.019 -8.395 -6.306 1.074 1.151 CAY C9I 17
C9I CAZ C18 C 0 1 Y N N N N N 11.189 3.585 -7.838 -5.228 1.147 1.979 CAZ C9I 18
C9I CBA C19 C 0 1 Y N N N N N 10.545 3.028 -6.710 -4.057 0.447 1.694 CBA C9I 19
C9I CBB C20 C 0 1 Y N N N N N 12.699 0.125 -6.057 -4.978 -1.205 -1.467 CBB C9I 20
C9I CBC C21 C 0 1 Y N N N N N 13.873 -0.432 -6.630 -6.057 -1.277 -2.294 CBC C9I 21
C9I CBD C22 C 0 1 Y N N N N N 14.493 0.135 -7.757 -7.230 -0.582 -2.007 CBD C9I 22
C9I CBE C23 C 0 1 Y N N N N N 13.962 1.274 -8.324 -7.331 0.189 -0.890 CBE C9I 23
C9I NAC N1 N 0 1 Y N N N N N 12.566 8.406 0.071 5.368 -1.136 0.590 NAC C9I 24
C9I NAH N2 N 0 1 N N N N N N 10.559 6.749 -2.502 2.480 1.026 0.258 NAH C9I 25
C9I NAI N3 N 0 1 N N N N N N 13.952 11.708 -0.578 8.521 -0.521 -1.041 NAI C9I 26
C9I NAJ N4 N 0 1 N N N N N N 13.907 10.514 1.451 7.945 -2.276 0.365 NAJ C9I 27
C9I NAQ N5 N 0 1 N N N N N N 9.600 2.486 -4.190 -1.549 -0.363 0.904 NAQ C9I 28
C9I OAM O1 O 0 1 N N N N N N 9.259 5.629 -3.971 0.726 2.410 0.010 OAM C9I 29
C9I OAO O2 O 0 1 N N N N N N 9.898 7.785 -4.466 2.672 2.861 -1.026 OAO C9I 30
C9I OAT O3 O 0 1 N N N N N N 11.580 3.448 -3.519 -1.323 0.976 -0.851 OAT C9I 31
C9I H1 H1 H 0 1 N N N N N N 12.520 10.787 -2.255 6.700 1.140 -1.459 H1 C9I 32
C9I H2 H2 H 0 1 N N N N N N 11.624 6.452 -0.132 3.444 -1.177 1.360 H2 C9I 33
C9I H3 H3 H 0 1 N N N N N N 11.099 9.139 -3.411 4.423 2.099 -1.221 H3 C9I 34
C9I H4 H4 H 0 1 N N N N N N 9.832 5.455 -0.900 1.715 0.362 2.115 H4 C9I 35
C9I H5 H5 H 0 1 N N N N N N 11.351 4.890 -1.673 1.173 -0.581 0.692 H5 C9I 36
C9I H6 H6 H 0 1 N N N N N N 8.617 4.232 -2.490 -0.078 1.788 1.852 H6 C9I 37
C9I H7 H7 H 0 1 N N N N N N 10.999 0.906 -4.212 -2.522 -1.111 -0.797 H7 C9I 38
C9I H8 H8 H 0 1 N N N N N N 8.353 0.794 -5.720 -2.834 -2.436 1.934 H8 C9I 39
C9I H9 H9 H 0 1 N N N N N N 9.647 -0.435 -5.924 -3.659 -2.972 0.450 H9 C9I 40
C9I H10 H10 H 0 1 N N N N N N 7.957 -1.183 -4.233 -1.463 -3.322 -0.645 H10 C9I 41
C9I H11 H11 H 0 1 N N N N N N 9.563 -0.932 -3.467 -0.637 -2.785 0.838 H11 C9I 42
C9I H12 H12 H 0 1 N N N N N N 8.269 0.297 -3.263 -1.594 -4.286 0.845 H12 C9I 43
C9I H13 H13 H 0 1 N N N N N N 12.816 3.449 -9.256 -7.207 1.622 1.385 H13 C9I 44
C9I H14 H14 H 0 1 N N N N N N 10.782 4.482 -8.281 -5.283 1.752 2.872 H14 C9I 45
C9I H15 H15 H 0 1 N N N N N N 9.672 3.530 -6.319 -3.216 0.522 2.367 H15 C9I 46
C9I H16 H16 H 0 1 N N N N N N 12.234 -0.340 -5.200 -4.076 -1.748 -1.703 H16 C9I 47
C9I H17 H17 H 0 1 N N N N N N 14.302 -1.318 -6.186 -6.003 -1.882 -3.187 H17 C9I 48
C9I H18 H18 H 0 1 N N N N N N 15.379 -0.318 -8.176 -8.071 -0.656 -2.680 H18 C9I 49
C9I H19 H19 H 0 1 N N N N N N 14.434 1.721 -9.186 -8.247 0.722 -0.679 H19 C9I 50
C9I H20 H20 H 0 1 N N N N N N 14.489 12.356 -0.038 9.409 -0.902 -1.126 H20 C9I 51
C9I H21 H21 H 0 1 N N N N N N 13.625 9.705 1.967 7.280 -2.716 0.918 H21 C9I 52
C9I H22 H22 H 0 1 N N N N N N 14.439 11.233 1.899 8.833 -2.657 0.280 H22 C9I 53
C9I H23 H23 H 0 1 N N N N N N 8.601 2.528 -4.157 -1.242 -0.627 1.785 H23 C9I 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C9I CAY CAZ DOUB Y N 1
C9I CAY CAX SING Y N 2
C9I CBE CAX DOUB Y N 3
C9I CBE CBD SING Y N 4
C9I CAZ CBA SING Y N 5
C9I CAX CAW SING Y N 6
C9I CBD CBC DOUB Y N 7
C9I CBA CAS DOUB Y N 8
C9I CBC CBB SING Y N 9
C9I CAW CAS SING Y N 10
C9I CAW CBB DOUB Y N 11
C9I CAS CAR SING N N 12
C9I CAU CAR SING N N 13
C9I CAU CAV SING N N 14
C9I CAR NAQ SING N N 15
C9I OAO CAN DOUB N N 16
C9I NAQ CAP SING N N 17
C9I OAM CAN SING N N 18
C9I OAM CAL SING N N 19
C9I CAN NAH SING N N 20
C9I CAP OAT DOUB N N 21
C9I CAP CAL SING N N 22
C9I CAL CAK SING N N 23
C9I NAH CAE SING N N 24
C9I NAH CAK SING N N 25
C9I CAF CAE DOUB Y N 26
C9I CAF CAA SING Y N 27
C9I CAE CAD SING Y N 28
C9I CAA CAB DOUB Y N 29
C9I CAD NAC DOUB Y N 30
C9I NAI CAG DOUB N N 31
C9I CAB NAC SING Y N 32
C9I CAB CAG SING N N 33
C9I CAG NAJ SING N N 34
C9I CAA H1 SING N N 35
C9I CAD H2 SING N N 36
C9I CAF H3 SING N N 37
C9I CAK H4 SING N N 38
C9I CAK H5 SING N N 39
C9I CAL H6 SING N N 40
C9I CAR H7 SING N N 41
C9I CAU H8 SING N N 42
C9I CAU H9 SING N N 43
C9I CAV H10 SING N N 44
C9I CAV H11 SING N N 45
C9I CAV H12 SING N N 46
C9I CAY H13 SING N N 47
C9I CAZ H14 SING N N 48
C9I CBA H15 SING N N 49
C9I CBB H16 SING N N 50
C9I CBC H17 SING N N 51
C9I CBD H18 SING N N 52
C9I CBE H19 SING N N 53
C9I NAI H20 SING N N 54
C9I NAJ H21 SING N N 55
C9I NAJ H22 SING N N 56
C9I NAQ H23 SING N N 57
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C9I InChI InChI 1.06 InChI=1S/C23H23N5O3/c1-2-18(17-9-5-7-14-6-3-4-8-16(14)17)27-22(29)20-13-28(23(30)31-20)15-10-11-19(21(24)25)26-12-15/h3-12,18,20H,2,13H2,1H3,(H3,24,25)(H,27,29)/t18-,20+/m0/s1
C9I InChIKey InChI 1.06 QAGBDIKHIHPMIP-AZUAARDMSA-N
C9I SMILES_CANONICAL CACTVS 3.385 CC[C@H](NC(=O)[C@H]1CN(C(=O)O1)c2ccc(nc2)C(N)=N)c3cccc4ccccc34
C9I SMILES CACTVS 3.385 CC[CH](NC(=O)[CH]1CN(C(=O)O1)c2ccc(nc2)C(N)=N)c3cccc4ccccc34
C9I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/c1ccc(cn1)N2C[C@@H](OC2=O)C(=O)N[C@@H](CC)c3cccc4c3cccc4)\N"
C9I SMILES "OpenEye OEToolkits" 2.0.7 CCC(c1cccc2c1cccc2)NC(=O)C3CN(C(=O)O3)c4ccc(nc4)C(=N)N
#
_pdbx_chem_comp_identifier.comp_id C9I
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(5~{R})-3-(6-carbamimidoylpyridin-3-yl)-~{N}-[(1~{S})-1-naphthalen-1-ylpropyl]-2-oxidanylidene-1,3-oxazolidine-5-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C9I 'Create component' 2021-12-14 PDBE
C9I 'Modify descriptor' 2022-08-22 RCSB
C9I 'Initial release' 2022-11-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
C9I CAA C 7.140 -4.860 1
C9I CAB C 5.649 -5.017 2
C9I CAD C 5.377 -2.433 3
C9I CAE C 6.869 -2.276 4
C9I CAF C 7.750 -3.489 5
C9I CAG C 5.038 -6.387 6
C9I CAK C 8.946 -0.594 7
C9I CAL C 9.103 0.898 8
C9I CAN C 6.729 0.393 9
C9I CAP C 10.402 1.648 10
C9I CAR C 11.701 3.898 11
C9I CAS C 11.701 5.398 12
C9I CAU C 13.000 3.148 13
C9I CAV C 13.000 1.648 14
C9I CAW C 13.000 6.148 15
C9I CAX C 13.000 7.648 16
C9I CAY C 11.701 8.398 17
C9I CAZ C 10.402 7.648 18
C9I CBA C 10.402 6.148 19
C9I CBB C 14.341 5.346 20
C9I CBC C 15.700 6.117 21
C9I CBD C 15.700 7.679 22
C9I CBE C 14.341 8.450 23
C9I NAC N 4.767 -3.803 24
C9I NAH N 7.479 -0.906 25
C9I NAI N 3.547 -6.544 26
C9I NAJ N 5.920 -7.601 27
C9I NAQ N 10.402 3.148 28
C9I OAM O 7.732 1.508 29
C9I OAO O 5.237 0.550 30
C9I OAT O 11.701 0.898 31
C9I H20 H 2.936 -7.914 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
C9I CAY CAZ DOUBLE NONE 1
C9I CAY CAX SINGLE NONE 2
C9I CBE CAX DOUBLE NONE 3
C9I CBE CBD SINGLE NONE 4
C9I CAZ CBA SINGLE NONE 5
C9I CAX CAW SINGLE NONE 6
C9I CBD CBC DOUBLE NONE 7
C9I CBA CAS DOUBLE NONE 8
C9I CBC CBB SINGLE NONE 9
C9I CAW CAS SINGLE NONE 10
C9I CAW CBB DOUBLE NONE 11
C9I CAS CAR SINGLE NONE 12
C9I CAR CAU SINGLE BEGINDASH 13
C9I CAU CAV SINGLE NONE 14
C9I CAR NAQ SINGLE NONE 15
C9I OAO CAN DOUBLE NONE 16
C9I NAQ CAP SINGLE NONE 17
C9I OAM CAN SINGLE NONE 18
C9I OAM CAL SINGLE NONE 19
C9I CAN NAH SINGLE NONE 20
C9I CAP OAT DOUBLE NONE 21
C9I CAL CAP SINGLE BEGINWEDGE 22
C9I CAL CAK SINGLE NONE 23
C9I NAH CAE SINGLE NONE 24
C9I NAH CAK SINGLE NONE 25
C9I CAF CAE SINGLE NONE 26
C9I CAF CAA DOUBLE NONE 27
C9I CAE CAD DOUBLE NONE 28
C9I CAA CAB SINGLE NONE 29
C9I CAD NAC SINGLE NONE 30
C9I NAI CAG DOUBLE NONE 31
C9I CAB NAC DOUBLE NONE 32
C9I CAB CAG SINGLE ENDDOWNRIGHT 33
C9I CAG NAJ SINGLE ENDDOWNRIGHT 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
C9I MurckoScaffold S1 scaffold 'O=C(NCc1cccc2ccccc12)[C@H]1CN(c2cccnc2)C(=O)O1' InChI=1S/C20H17N3O3/c24-19(18-13-23(20(25)26-18)16-8-4-10-21-12-16)22-11-15-7-3-6-14-5-1-2-9-17(14)15/h1-10,12,18H,11,13H2,(H,22,24)/t18-/m1/s1 BDNTUWIBUUEKDA-GOSISDBHSA-N
C9I amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
C9I napthalene F2 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
C9I phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
C9I pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
C9I Z31478538 F5 fragment COCC(=O)NCc1ccccc1 InChI=1S/C10H13NO2/c1-13-8-10(12)11-7-9-5-3-2-4-6-9/h2-6H,7-8H2,1H3,(H,11,12) VLAPGEODGZEQPC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
C9I CAA S1 1
C9I CAB S1 1
C9I CAD S1 1
C9I CAE S1 1
C9I CAF S1 1
C9I CAK S1 1
C9I CAL S1 1
C9I CAN S1 1
C9I CAP S1 1
C9I CAR S1 1
C9I CAS S1 1
C9I CAW S1 1
C9I CAX S1 1
C9I CAY S1 1
C9I CAZ S1 1
C9I CBA S1 1
C9I CBB S1 1
C9I CBC S1 1
C9I CBD S1 1
C9I CBE S1 1
C9I NAC S1 1
C9I NAH S1 1
C9I NAQ S1 1
C9I OAM S1 1
C9I OAO S1 1
C9I OAT S1 1
C9I NAQ F1 1
C9I CAP F1 1
C9I OAT F1 1
C9I CAL F1 1
C9I CAZ F2 1
C9I CBA F2 1
C9I CAS F2 1
C9I CAW F2 1
C9I CAX F2 1
C9I CAY F2 1
C9I CBE F2 1
C9I CBD F2 1
C9I CBC F2 1
C9I CBB F2 1
C9I CAS F3 1
C9I CBA F3 1
C9I CAZ F3 1
C9I CAY F3 1
C9I CAX F3 1
C9I CAW F3 1
C9I CAW F3 2
C9I CAX F3 2
C9I CBE F3 2
C9I CBD F3 2
C9I CBC F3 2
C9I CBB F3 2
C9I CAB F4 1
C9I CAA F4 1
C9I CAF F4 1
C9I CAE F4 1
C9I CAD F4 1
C9I NAC F4 1
C9I CAN F5 1
C9I OAM F5 1
C9I CAL F5 1
C9I CAP F5 1
C9I OAT F5 1
C9I NAQ F5 1
C9I CAR F5 1
C9I CAS F5 1
C9I CBA F5 1
C9I CAZ F5 1
C9I CAY F5 1
C9I CAX F5 1
C9I CAW F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id C9I
_pdbe_chem_comp_rdkit_properties.exactmw 417.180
_pdbe_chem_comp_rdkit_properties.amw 417.469
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.217
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.622
_pdbe_chem_comp_rdkit_properties.tpsa 121.400
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.193
_pdbe_chem_comp_rdkit_properties.CrippenMR 114.429
_pdbe_chem_comp_rdkit_properties.chi0v 14.961
_pdbe_chem_comp_rdkit_properties.chi1v 8.079
_pdbe_chem_comp_rdkit_properties.chi2v 3.669
_pdbe_chem_comp_rdkit_properties.chi3v 3.669
_pdbe_chem_comp_rdkit_properties.chi4v 2.325
_pdbe_chem_comp_rdkit_properties.chi0n 37.961
_pdbe_chem_comp_rdkit_properties.chi1n 19.368
_pdbe_chem_comp_rdkit_properties.chi2n 3.669
_pdbe_chem_comp_rdkit_properties.chi3n 3.669
_pdbe_chem_comp_rdkit_properties.chi4n 2.325
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.940
_pdbe_chem_comp_rdkit_properties.kappa1 6.527
_pdbe_chem_comp_rdkit_properties.kappa2 8.430
_pdbe_chem_comp_rdkit_properties.kappa3 4.046
_pdbe_chem_comp_rdkit_properties.Phi 1.775
#
_pdbe_chem_comp_external_mappings.comp_id C9I
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 165430623
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
C9I CAA 5.987 0.882 -0.028 ETKDGv3 1
C9I CAB 6.692 1.094 -1.316 ETKDGv3 2
C9I CAD 4.579 0.900 -2.443 ETKDGv3 3
C9I CAE 3.905 0.689 -1.298 ETKDGv3 4
C9I CAF 4.664 0.694 -0.024 ETKDGv3 5
C9I CAG 8.157 1.302 -1.360 ETKDGv3 6
C9I CAK 1.585 0.857 -0.187 ETKDGv3 7
C9I CAL 0.150 0.600 -0.721 ETKDGv3 8
C9I CAN 1.661 -0.032 -2.317 ETKDGv3 9
C9I CAP -0.631 -0.309 0.184 ETKDGv3 10
C9I CAR -2.238 -0.591 2.132 ETKDGv3 11
C9I CAS -3.292 -1.419 1.388 ETKDGv3 12
C9I CAU -2.839 0.213 3.308 ETKDGv3 13
C9I CAV -3.894 1.246 2.912 ETKDGv3 14
C9I CAW -4.068 -0.944 0.185 ETKDGv3 15
C9I CAX -4.999 -1.913 -0.469 ETKDGv3 16
C9I CAY -5.161 -3.252 0.118 ETKDGv3 17
C9I CAZ -4.487 -3.590 1.215 ETKDGv3 18
C9I CBA -3.540 -2.660 1.860 ETKDGv3 19
C9I CBB -3.987 0.305 -0.324 ETKDGv3 20
C9I CBC -4.763 0.685 -1.522 ETKDGv3 21
C9I CBD -5.570 -0.201 -2.112 ETKDGv3 22
C9I CBE -5.701 -1.559 -1.557 ETKDGv3 23
C9I NAC 6.003 1.098 -2.422 ETKDGv3 24
C9I NAH 2.474 0.507 -1.290 ETKDGv3 25
C9I NAI 8.843 1.299 -0.261 ETKDGv3 26
C9I NAJ 8.824 1.508 -2.612 ETKDGv3 27
C9I NAQ -1.428 0.246 1.240 ETKDGv3 28
C9I OAM 0.323 0.004 -2.002 ETKDGv3 29
C9I OAO 2.104 -0.552 -3.375 ETKDGv3 30
C9I OAT -0.547 -1.560 0.040 ETKDGv3 31
C9I H1 6.530 0.878 0.908 ETKDGv3 32
C9I H2 4.066 0.957 -3.391 ETKDGv3 33
C9I H3 4.157 0.536 0.918 ETKDGv3 34
C9I H4 1.815 0.221 0.696 ETKDGv3 35
C9I H5 1.716 1.928 0.082 ETKDGv3 36
C9I H6 -0.389 1.564 -0.846 ETKDGv3 37
C9I H7 -1.519 -1.297 2.607 ETKDGv3 38
C9I H8 -2.017 0.734 3.846 ETKDGv3 39
C9I H9 -3.300 -0.498 4.029 ETKDGv3 40
C9I H10 -4.755 0.758 2.411 ETKDGv3 41
C9I H11 -4.272 1.748 3.827 ETKDGv3 42
C9I H12 -3.459 2.024 2.254 ETKDGv3 43
C9I H13 -5.840 -3.968 -0.330 ETKDGv3 44
C9I H14 -4.624 -4.576 1.641 ETKDGv3 45
C9I H15 -3.019 -3.023 2.739 ETKDGv3 46
C9I H16 -3.379 1.072 0.116 ETKDGv3 47
C9I H17 -4.674 1.686 -1.923 ETKDGv3 48
C9I H18 -6.137 0.080 -2.990 ETKDGv3 49
C9I H19 -6.380 -2.257 -2.032 ETKDGv3 50
C9I H20 9.877 1.443 -0.256 ETKDGv3 51
C9I H21 8.297 1.515 -3.513 ETKDGv3 52
C9I H22 9.857 1.655 -2.646 ETKDGv3 53
C9I H23 -1.358 1.274 1.418 ETKDGv3 54
#