Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : BV5    

Bonds between two atoms of the molecule

Total Number of Bonds: 45


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.38 N Y
2 C1 C6 C C doub 1.38 N Y
3 C2 C3 C C doub 1.38 N Y
4 C3 C4 C C sing 1.38 N Y
5 C4 C5 C C doub 1.39 N Y
6 C4 S12 C S sing 1.76 N N
7 C5 C6 C C sing 1.39 N Y
8 C5 O7 C O sing 1.36 N N
9 O7 C8 O C sing 1.43 N N
10 C8 F9 C F sing 1.4 N N
11 C8 F10 C F sing 1.4 N N
12 C8 F11 C F sing 1.4 N N
13 S12 O13 S O doub 1.42 N N
14 S12 O14 S O doub 1.42 N N
15 S12 N15 S N sing 1.66 N N
16 N15 C16 N C sing 1.35 N N
17 C16 O17 C O doub 1.21 N N
18 C16 C18 C C sing 1.51 N N
19 C18 C19 C C sing 1.53 N N
20 C19 C20 C C sing 1.53 N N
21 C20 C21 C C sing 1.53 N N
22 C20 C25 C C sing 1.53 N N
23 C21 C22 C C sing 1.53 N N
24 C22 N23 C N sing 1.47 N N
25 N23 C24 N C sing 1.47 N N
26 C24 C25 C C sing 1.53 N N
27 C1 H1 C H sing 1.08 N N
28 C2 H2 C H sing 1.08 N N
29 C6 H6 C H sing 1.08 N N
30 C3 H3 C H sing 1.08 N N
31 N15 H15 N H sing 0.97 N N
32 C18 H181 C H sing 1.09 N N
33 C18 H182 C H sing 1.09 N N
34 C19 H191 C H sing 1.09 N N
35 C19 H192 C H sing 1.09 N N
36 C20 H20 C H sing 1.09 N N
37 C21 H211 C H sing 1.09 N N
38 C21 H212 C H sing 1.09 N N
39 C25 H251 C H sing 1.09 N N
40 C25 H252 C H sing 1.09 N N
41 C22 H221 C H sing 1.09 N N
42 C22 H222 C H sing 1.09 N N
43 N23 H23 N H sing 1.01 N N
44 C24 H241 C H sing 1.09 N N
45 C24 H242 C H sing 1.09 N N