Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : BV5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 44


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -3.397 0.373 -2.733
2 C2 C C2 N Y N 0 -2.922 1.666 -2.613
3 C3 C C3 N Y N 0 -2.345 2.086 -1.429
4 C4 C C4 N Y N 0 -2.241 1.213 -0.362
5 C5 C C5 N Y N 0 -2.717 -0.084 -0.481
6 C6 C C6 N Y N 0 -3.296 -0.503 -1.67
7 O7 O O7 N N N 0 -2.616 -0.945 0.567
8 C8 C C8 N N N 0 -3.128 -2.265 0.373
9 F9 F F9 N N N 0 -2.447 -2.878 -0.684
10 F10 F F10 N N N 0 -2.944 -3.012 1.542
11 F11 F F11 N N N 0 -4.492 -2.197 0.073
12 N15 N N15 N N N 0 -0.123 0.86 1.359
13 S12 S S12 N N N 0 -1.505 1.748 1.146
14 O13 O O13 N N N 0 -1.09 3.091 0.936
15 O14 O O14 N N N 0 -2.393 1.362 2.186
16 C16 C C16 N N N 0 0.9 0.987 0.491
17 O17 O O17 N N N 0 0.848 1.819 -0.391
18 C18 C C18 N N N 0 2.108 0.095 0.614
19 C19 C C19 N N N 0 3.114 0.443 -0.486
20 C20 C C20 N N N 0 4.34 -0.463 -0.36
21 C21 C C21 N N N 0 5.291 -0.202 -1.532
22 C22 C C22 N N N 0 6.543 -1.066 -1.368
23 N23 N N23 N N N 0 7.203 -0.739 -0.098
24 C24 C C24 N N N 0 6.326 -1.026 1.045
25 C25 C C25 N N N 0 5.067 -0.161 0.953
26 H1 H H1 N N N 0 -3.851 0.049 -3.658
27 H2 H H2 N N N 0 -3.002 2.35 -3.445
28 H6 H H6 N N N 0 -3.668 -1.513 -1.765
29 H3 H H3 N N N 0 -1.974 3.096 -1.337
30 H15 H H15 N N N 0 -0.05 0.249 2.108
31 H181 H H181 N N N 0 2.571 0.243 1.59
32 H182 H H182 N N N 0 1.803 -0.947 0.511
33 H191 H H191 N N N 0 2.651 0.294 -1.461
34 H192 H H192 N N N 0 3.419 1.484 -0.383
35 H20 H H20 N N N 0 4.026 -1.506 -0.371
36 H211 H H211 N N N 0 4.793 -0.456 -2.468
37 H212 H H212 N N N 0 5.574 0.85 -1.544
38 H251 H H251 N N N 0 5.347 0.893 0.98
39 H252 H H252 N N N 0 4.41 -0.385 1.793
40 H221 H H221 N N N 0 6.261 -2.119 -1.37
41 H222 H H222 N N N 0 7.228 -0.873 -2.194
42 H23 H H23 N N N 0 8.082 -1.227 -0.011
43 H241 H H241 N N N 0 6.045 -2.079 1.031
44 H242 H H242 N N N 0 6.854 -0.803 1.972