Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : B9K    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C02 C01 C C doub 1.38 N Y
2 C02 N03 C N sing 1.32 N Y
3 C01 C06 C C sing 1.4 N Y
4 N03 C04 N C doub 1.33 N Y
5 C12 C11 C C sing 1.51 N N
6 C06 C07 C C sing 1.48 N N
7 C06 C05 C C doub 1.4 N Y
8 C11 C07 C C doub 1.36 N Y
9 C11 N10 C N sing 1.34 N Y
10 C04 C05 C C sing 1.39 N Y
11 C04 N15 C N sing 1.39 N N
12 C07 N08 C N sing 1.39 N Y
13 N10 C09 N C doub 1.32 N Y
14 N15 C16 N C sing 1.4 N N
15 N08 C09 N C sing 1.36 N Y
16 C09 S13 C S sing 1.76 N N
17 C16 C17 C C doub 1.39 N Y
18 C16 C21 C C sing 1.39 N Y
19 C14 S13 C S sing 1.81 N N
20 C17 C18 C C sing 1.38 N Y
21 C21 C20 C C doub 1.38 N Y
22 C18 C19 C C doub 1.39 N Y
23 C20 C19 C C sing 1.39 N Y
24 C19 N22 C N sing 1.4 N N
25 N22 C27 N C sing 1.47 N N
26 N22 C23 N C sing 1.47 N N
27 C27 C26 C C sing 1.53 N N
28 C23 C24 C C sing 1.53 N N
29 C26 O25 C O sing 1.43 N N
30 C24 O25 C O sing 1.43 N N
31 C17 H1 C H sing 1.08 N N
32 C20 H2 C H sing 1.08 N N
33 C21 H3 C H sing 1.08 N N
34 C24 H4 C H sing 1.09 N N
35 C24 H5 C H sing 1.09 N N
36 C26 H6 C H sing 1.09 N N
37 C26 H7 C H sing 1.09 N N
38 C01 H8 C H sing 1.08 N N
39 C02 H9 C H sing 1.08 N N
40 C05 H10 C H sing 1.08 N N
41 N08 H11 N H sing 0.97 N N
42 C12 H13 C H sing 1.09 N N
43 C12 H14 C H sing 1.09 N N
44 C12 H15 C H sing 1.09 N N
45 C14 H16 C H sing 1.09 N N
46 C14 H17 C H sing 1.09 N N
47 C14 H18 C H sing 1.09 N N
48 N15 H19 N H sing 0.97 N N
49 C18 H20 C H sing 1.08 N N
50 C23 H21 C H sing 1.09 N N
51 C23 H22 C H sing 1.09 N N
52 C27 H23 C H sing 1.09 N N
53 C27 H24 C H sing 1.09 N N