data_B9K
#
_chem_comp.id B9K
_chem_comp.name 4-(4-methyl-2-methylsulfanyl-1~{H}-imidazol-5-yl)-~{N}-(4-morpholin-4-ylphenyl)pyridin-2-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H23 N5 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-09-26
_chem_comp.pdbx_modified_date 2018-08-03
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 381.495
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code B9K
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6EKD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B9K C17 C1 C 0 1 Y N N N N N 8.692 32.401 13.214 -2.401 -0.315 0.351 C17 B9K 1
B9K C20 C2 C 0 1 Y N N N N N 6.862 33.312 15.112 -4.102 1.718 -0.464 C20 B9K 2
B9K C21 C3 C 0 1 Y N N N N N 6.954 33.937 13.880 -2.747 1.959 -0.352 C21 B9K 3
B9K C24 C4 C 0 1 N N N N N N 6.829 31.592 19.187 -8.248 0.883 0.343 C24 B9K 4
B9K C26 C5 C 0 1 N N N N N N 8.772 30.425 18.728 -7.800 -1.419 -0.142 C26 B9K 5
B9K C01 C6 C 0 1 Y N N N N N 11.223 35.361 9.446 2.163 -1.735 -0.925 C01 B9K 6
B9K C02 C7 C 0 1 Y N N N N N 9.935 35.435 8.994 0.807 -1.857 -1.126 C02 B9K 7
B9K N03 N1 N 0 1 Y N N N N N 8.933 35.050 9.761 -0.025 -0.900 -0.758 N03 B9K 8
B9K C04 C8 C 0 1 Y N N N N N 9.108 34.574 10.972 0.399 0.216 -0.182 C04 B9K 9
B9K C05 C9 C 0 1 Y N N N N N 10.392 34.486 11.507 1.750 0.420 0.058 C05 B9K 10
B9K C06 C10 C 0 1 Y N N N N N 11.479 34.902 10.726 2.661 -0.572 -0.318 C06 B9K 11
B9K C07 C11 C 0 1 Y N N N N N 12.773 34.786 11.239 4.108 -0.403 -0.078 C07 B9K 12
B9K N08 N2 N 0 1 Y N N N N N 13.120 33.911 12.179 4.862 0.732 -0.329 N08 B9K 13
B9K C09 C12 C 0 1 Y N N N N N 14.398 34.059 12.423 6.140 0.446 0.039 C09 B9K 14
B9K N10 N3 N 0 1 Y N N N N N 14.912 34.980 11.652 6.182 -0.788 0.492 N10 B9K 15
B9K C11 C13 C 0 1 Y N N N N N 13.950 35.462 10.890 4.960 -1.328 0.439 C11 B9K 16
B9K C12 C14 C 0 1 N N N N N N 14.177 36.573 9.873 4.591 -2.723 0.874 C12 B9K 17
B9K S13 S1 S 0 1 N N N N N N 15.309 33.109 13.631 7.512 1.546 -0.072 S13 B9K 18
B9K C14 C15 C 0 1 N N N N N N 17.060 33.181 13.168 8.822 0.484 0.584 C14 B9K 19
B9K N15 N4 N 0 1 N N N N N N 7.895 34.182 11.673 -0.520 1.192 0.186 N15 B9K 20
B9K C16 C16 C 0 1 Y N N N N N 7.870 33.491 12.936 -1.893 0.945 0.061 C16 B9K 21
B9K C18 C17 C 0 1 Y N N N N N 8.624 31.777 14.453 -3.754 -0.559 0.228 C18 B9K 22
B9K C19 C18 C 0 1 Y N N N N N 7.698 32.225 15.422 -4.609 0.457 -0.180 C19 B9K 23
B9K N22 N5 N 0 1 N N N N N N 7.616 31.571 16.734 -5.982 0.213 -0.293 N22 B9K 24
B9K C23 C19 C 0 1 N N N N N N 6.805 32.228 17.806 -6.753 1.145 0.542 C23 B9K 25
B9K O25 O1 O 0 1 N N N N N N 8.136 31.316 19.573 -8.533 -0.484 0.653 O25 B9K 26
B9K C27 C20 C 0 1 N N N N N N 8.845 30.943 17.285 -6.300 -1.180 0.052 C27 B9K 27
B9K H1 H1 H 0 1 N N N N N N 9.382 32.041 12.466 -1.736 -1.105 0.668 H1 B9K 28
B9K H2 H2 H 0 1 N N N N N N 6.144 33.661 15.839 -4.766 2.509 -0.780 H2 B9K 29
B9K H3 H3 H 0 1 N N N N N N 6.311 34.774 13.652 -2.353 2.940 -0.573 H3 B9K 30
B9K H4 H4 H 0 1 N N N N N N 6.376 32.284 19.912 -8.823 1.533 1.003 H4 B9K 31
B9K H5 H5 H 0 1 N N N N N N 6.253 30.655 19.164 -8.519 1.085 -0.693 H5 B9K 32
B9K H6 H6 H 0 1 N N N N N N 8.219 29.474 18.735 -8.050 -2.434 0.168 H6 B9K 33
B9K H7 H7 H 0 1 N N N N N N 9.795 30.257 19.096 -8.057 -1.285 -1.192 H7 B9K 34
B9K H8 H8 H 0 1 N N N N N N 12.039 35.660 8.805 2.834 -2.526 -1.226 H8 B9K 35
B9K H9 H9 H 0 1 N N N N N N 9.736 35.812 8.001 0.417 -2.750 -1.593 H9 B9K 36
B9K H10 H10 H 0 1 N N N N N N 10.547 34.104 12.505 2.093 1.330 0.528 H10 B9K 37
B9K H11 H11 H 0 1 N N N N N N 12.510 33.254 12.623 4.540 1.569 -0.698 H11 B9K 38
B9K H13 H13 H 0 1 N N N N N N 15.233 36.879 9.893 4.699 -3.407 0.032 H13 B9K 39
B9K H14 H14 H 0 1 N N N N N N 13.921 36.208 8.868 5.249 -3.037 1.684 H14 B9K 40
B9K H15 H15 H 0 1 N N N N N N 13.541 37.435 10.123 3.557 -2.734 1.220 H15 B9K 41
B9K H16 H16 H 0 1 N N N N N N 17.655 32.605 13.892 8.573 0.188 1.603 H16 B9K 42
B9K H17 H17 H 0 1 N N N N N N 17.191 32.754 12.163 8.915 -0.405 -0.041 H17 B9K 43
B9K H18 H18 H 0 1 N N N N N N 17.396 34.228 13.168 9.766 1.028 0.583 H18 B9K 44
B9K H19 H19 H 0 1 N N N N N N 7.018 34.408 11.248 -0.211 2.045 0.530 H19 B9K 45
B9K H20 H20 H 0 1 N N N N N N 9.280 30.948 14.676 -4.148 -1.540 0.448 H20 B9K 46
B9K H21 H21 H 0 1 N N N N N N 7.170 33.260 17.911 -6.522 2.170 0.252 H21 B9K 47
B9K H22 H22 H 0 1 N N N N N N 5.759 32.242 17.467 -6.494 0.996 1.590 H22 B9K 48
B9K H23 H23 H 0 1 N N N N N N 9.101 30.091 16.638 -6.033 -1.367 1.093 H23 B9K 49
B9K H24 H24 H 0 1 N N N N N N 9.649 31.692 17.241 -5.737 -1.853 -0.595 H24 B9K 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B9K C02 C01 DOUB Y N 1
B9K C02 N03 SING Y N 2
B9K C01 C06 SING Y N 3
B9K N03 C04 DOUB Y N 4
B9K C12 C11 SING N N 5
B9K C06 C07 SING N N 6
B9K C06 C05 DOUB Y N 7
B9K C11 C07 DOUB Y N 8
B9K C11 N10 SING Y N 9
B9K C04 C05 SING Y N 10
B9K C04 N15 SING N N 11
B9K C07 N08 SING Y N 12
B9K N10 C09 DOUB Y N 13
B9K N15 C16 SING N N 14
B9K N08 C09 SING Y N 15
B9K C09 S13 SING N N 16
B9K C16 C17 DOUB Y N 17
B9K C16 C21 SING Y N 18
B9K C14 S13 SING N N 19
B9K C17 C18 SING Y N 20
B9K C21 C20 DOUB Y N 21
B9K C18 C19 DOUB Y N 22
B9K C20 C19 SING Y N 23
B9K C19 N22 SING N N 24
B9K N22 C27 SING N N 25
B9K N22 C23 SING N N 26
B9K C27 C26 SING N N 27
B9K C23 C24 SING N N 28
B9K C26 O25 SING N N 29
B9K C24 O25 SING N N 30
B9K C17 H1 SING N N 31
B9K C20 H2 SING N N 32
B9K C21 H3 SING N N 33
B9K C24 H4 SING N N 34
B9K C24 H5 SING N N 35
B9K C26 H6 SING N N 36
B9K C26 H7 SING N N 37
B9K C01 H8 SING N N 38
B9K C02 H9 SING N N 39
B9K C05 H10 SING N N 40
B9K N08 H11 SING N N 41
B9K C12 H13 SING N N 42
B9K C12 H14 SING N N 43
B9K C12 H15 SING N N 44
B9K C14 H16 SING N N 45
B9K C14 H17 SING N N 46
B9K C14 H18 SING N N 47
B9K N15 H19 SING N N 48
B9K C18 H20 SING N N 49
B9K C23 H21 SING N N 50
B9K C23 H22 SING N N 51
B9K C27 H23 SING N N 52
B9K C27 H24 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B9K InChI InChI 1.03 InChI=1S/C20H23N5OS/c1-14-19(24-20(22-14)27-2)15-7-8-21-18(13-15)23-16-3-5-17(6-4-16)25-9-11-26-12-10-25/h3-8,13H,9-12H2,1-2H3,(H,21,23)(H,22,24)
B9K InChIKey InChI 1.03 IATSSYNKRCFJAY-UHFFFAOYSA-N
B9K SMILES_CANONICAL CACTVS 3.385 CSc1[nH]c(c(C)n1)c2ccnc(Nc3ccc(cc3)N4CCOCC4)c2
B9K SMILES CACTVS 3.385 CSc1[nH]c(c(C)n1)c2ccnc(Nc3ccc(cc3)N4CCOCC4)c2
B9K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 Cc1c([nH]c(n1)SC)c2ccnc(c2)Nc3ccc(cc3)N4CCOCC4
B9K SMILES "OpenEye OEToolkits" 2.0.6 Cc1c([nH]c(n1)SC)c2ccnc(c2)Nc3ccc(cc3)N4CCOCC4
#
_pdbx_chem_comp_identifier.comp_id B9K
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
4-(4-methyl-2-methylsulfanyl-1~{H}-imidazol-5-yl)-~{N}-(4-morpholin-4-ylphenyl)pyridin-2-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B9K 'Create component' 2017-09-26 EBI
B9K 'Initial release' 2018-08-08 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
B9K C17 C 3.000 -1.761 1
B9K C20 C 5.598 -3.261 2
B9K C21 C 5.598 -1.761 3
B9K C24 C 3.000 -7.761 4
B9K C26 C 5.598 -7.761 5
B9K C01 C 8.196 2.739 6
B9K C02 C 8.196 1.239 7
B9K N03 N 6.897 0.489 8
B9K C04 C 5.598 1.239 9
B9K C05 C 5.598 2.739 10
B9K C06 C 6.897 3.489 11
B9K C07 C 6.897 4.989 12
B9K N08 N 8.111 5.871 13
B9K C09 C 7.647 7.297 14
B9K N10 N 6.147 7.297 15
B9K C11 C 5.684 5.871 16
B9K C12 C 4.257 5.407 17
B9K S13 S 8.529 8.511 18
B9K C14 C 10.021 8.354 19
B9K N15 N 4.299 0.489 20
B9K C16 C 4.299 -1.011 21
B9K C18 C 3.000 -3.261 22
B9K C19 C 4.299 -4.011 23
B9K N22 N 4.299 -5.511 24
B9K C23 C 3.000 -6.261 25
B9K O25 O 4.299 -8.511 26
B9K C27 C 5.598 -6.261 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
B9K C02 C01 DOUBLE NONE 1
B9K C02 N03 SINGLE NONE 2
B9K C01 C06 SINGLE NONE 3
B9K N03 C04 DOUBLE NONE 4
B9K C12 C11 SINGLE NONE 5
B9K C06 C07 SINGLE NONE 6
B9K C06 C05 DOUBLE NONE 7
B9K C11 C07 DOUBLE NONE 8
B9K C11 N10 SINGLE NONE 9
B9K C04 C05 SINGLE NONE 10
B9K C04 N15 SINGLE NONE 11
B9K C07 N08 SINGLE NONE 12
B9K N10 C09 DOUBLE NONE 13
B9K N15 C16 SINGLE NONE 14
B9K N08 C09 SINGLE NONE 15
B9K C09 S13 SINGLE NONE 16
B9K C16 C17 DOUBLE NONE 17
B9K C16 C21 SINGLE NONE 18
B9K C14 S13 SINGLE NONE 19
B9K C17 C18 SINGLE NONE 20
B9K C21 C20 DOUBLE NONE 21
B9K C18 C19 DOUBLE NONE 22
B9K C20 C19 SINGLE NONE 23
B9K C19 N22 SINGLE NONE 24
B9K N22 C27 SINGLE NONE 25
B9K N22 C23 SINGLE NONE 26
B9K C27 C26 SINGLE NONE 27
B9K C23 C24 SINGLE NONE 28
B9K C26 O25 SINGLE NONE 29
B9K C24 O25 SINGLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
B9K MurckoScaffold S1 scaffold 'c1cc(-c2cnc[nH]2)cc(Nc2ccc(N3CCOCC3)cc2)n1' InChI=1S/C18H19N5O/c1-3-16(23-7-9-24-10-8-23)4-2-15(1)22-18-11-14(5-6-20-18)17-12-19-13-21-17/h1-6,11-13H,7-10H2,(H,19,21)(H,20,22) SFJKIEZYZUPDGU-UHFFFAOYSA-N
B9K imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
B9K phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
B9K pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
B9K Z752989138 F4 fragment CCN(CCO)c1ccc(N)cc1 InChI=1S/C10H16N2O/c1-2-12(7-8-13)10-5-3-9(11)4-6-10/h3-6,13H,2,7-8,11H2,1H3 WFXLRLQSHRNHCE-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
B9K C17 S1 1
B9K C20 S1 1
B9K C21 S1 1
B9K C24 S1 1
B9K C26 S1 1
B9K C01 S1 1
B9K C02 S1 1
B9K N03 S1 1
B9K C04 S1 1
B9K C05 S1 1
B9K C06 S1 1
B9K C07 S1 1
B9K N08 S1 1
B9K C09 S1 1
B9K N10 S1 1
B9K C11 S1 1
B9K N15 S1 1
B9K C16 S1 1
B9K C18 S1 1
B9K C19 S1 1
B9K N22 S1 1
B9K C23 S1 1
B9K O25 S1 1
B9K C27 S1 1
B9K C07 F1 1
B9K C11 F1 1
B9K N10 F1 1
B9K C09 F1 1
B9K N08 F1 1
B9K C17 F2 1
B9K C16 F2 1
B9K C21 F2 1
B9K C20 F2 1
B9K C19 F2 1
B9K C18 F2 1
B9K C02 F3 1
B9K C01 F3 1
B9K C06 F3 1
B9K C05 F3 1
B9K C04 F3 1
B9K N03 F3 1
B9K C24 F4 1
B9K C23 F4 1
B9K N22 F4 1
B9K C27 F4 1
B9K C26 F4 1
B9K O25 F4 1
B9K C19 F4 1
B9K C18 F4 1
B9K C17 F4 1
B9K C16 F4 1
B9K N15 F4 1
B9K C21 F4 1
B9K C20 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id B9K
_pdbe_chem_comp_rdkit_properties.exactmw 381.162
_pdbe_chem_comp_rdkit_properties.amw 381.505
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.300
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 195.355
_pdbe_chem_comp_rdkit_properties.tpsa 66.070
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.398
_pdbe_chem_comp_rdkit_properties.CrippenMR 107.603
_pdbe_chem_comp_rdkit_properties.chi0v 13.869
_pdbe_chem_comp_rdkit_properties.chi1v 7.843
_pdbe_chem_comp_rdkit_properties.chi2v 3.369
_pdbe_chem_comp_rdkit_properties.chi3v 3.369
_pdbe_chem_comp_rdkit_properties.chi4v 2.170
_pdbe_chem_comp_rdkit_properties.chi0n 36.053
_pdbe_chem_comp_rdkit_properties.chi1n 18.421
_pdbe_chem_comp_rdkit_properties.chi2n 3.004
_pdbe_chem_comp_rdkit_properties.chi3n 3.004
_pdbe_chem_comp_rdkit_properties.chi4n 1.896
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.510
_pdbe_chem_comp_rdkit_properties.kappa1 5.301
_pdbe_chem_comp_rdkit_properties.kappa2 8.020
_pdbe_chem_comp_rdkit_properties.kappa3 4.092
_pdbe_chem_comp_rdkit_properties.Phi 1.575
#
_pdbe_chem_comp_external_mappings.comp_id B9K
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 134693850
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
B9K C17 2.121 1.595 0.511 ETKDGv3 1
B9K C20 2.957 -0.983 -0.250 ETKDGv3 2
B9K C21 1.652 -0.711 -0.128 ETKDGv3 3
B9K C24 7.439 -1.431 0.474 ETKDGv3 4
B9K C26 7.668 0.721 -0.359 ETKDGv3 5
B9K C01 -3.275 -0.683 -1.990 ETKDGv3 6
B9K C02 -1.991 -0.789 -2.344 ETKDGv3 7
B9K N03 -0.963 -0.232 -1.509 ETKDGv3 8
B9K C04 -1.240 0.382 -0.393 ETKDGv3 9
B9K C05 -2.653 0.535 0.024 ETKDGv3 10
B9K C06 -3.633 0.006 -0.726 ETKDGv3 11
B9K C07 -5.046 0.161 -0.313 ETKDGv3 12
B9K N08 -5.563 1.336 0.293 ETKDGv3 13
B9K C09 -6.926 1.005 0.515 ETKDGv3 14
B9K N10 -7.238 -0.190 0.132 ETKDGv3 15
B9K C11 -6.027 -0.739 -0.389 ETKDGv3 16
B9K C12 -5.932 -2.141 -0.903 ETKDGv3 17
B9K S13 -8.106 2.130 1.253 ETKDGv3 18
B9K C14 -7.732 1.587 2.948 ETKDGv3 19
B9K N15 -0.196 0.960 0.406 ETKDGv3 20
B9K C16 1.200 0.653 0.250 ETKDGv3 21
B9K C18 3.561 1.296 0.374 ETKDGv3 22
B9K C19 3.971 0.072 -0.001 ETKDGv3 23
B9K N22 5.376 -0.224 -0.117 ETKDGv3 24
B9K C23 5.909 -1.457 0.474 ETKDGv3 25
B9K O25 7.884 -0.122 0.760 ETKDGv3 26
B9K C27 6.247 0.605 -0.961 ETKDGv3 27
B9K H1 1.817 2.590 0.813 ETKDGv3 28
B9K H2 3.265 -1.981 -0.532 ETKDGv3 29
B9K H3 0.933 -1.504 -0.284 ETKDGv3 30
B9K H4 7.816 -2.120 1.258 ETKDGv3 31
B9K H5 7.839 -1.795 -0.502 ETKDGv3 32
B9K H6 8.432 0.514 -1.141 ETKDGv3 33
B9K H7 7.828 1.770 -0.028 ETKDGv3 34
B9K H8 -4.041 -1.073 -2.647 ETKDGv3 35
B9K H9 -1.720 -1.281 -3.270 ETKDGv3 36
B9K H10 -2.880 1.053 0.948 ETKDGv3 37
B9K H11 -5.078 2.240 0.487 ETKDGv3 38
B9K H13 -6.728 -2.762 -0.440 ETKDGv3 39
B9K H14 -4.949 -2.588 -0.645 ETKDGv3 40
B9K H15 -6.074 -2.148 -2.003 ETKDGv3 41
B9K H16 -8.361 2.160 3.659 ETKDGv3 42
B9K H17 -7.955 0.506 3.060 ETKDGv3 43
B9K H18 -6.663 1.775 3.181 ETKDGv3 44
B9K H19 -0.466 1.695 1.098 ETKDGv3 45
B9K H20 4.278 2.074 0.602 ETKDGv3 46
B9K H21 5.554 -1.539 1.525 ETKDGv3 47
B9K H22 5.554 -2.343 -0.095 ETKDGv3 48
B9K H23 5.821 1.621 -1.108 ETKDGv3 49
B9K H24 6.315 0.132 -1.965 ETKDGv3 50
#