Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : B1X    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N3 C5 N C trip 1.14 N N
2 C5 C6 C C sing 1.43 N N
3 C8 C6 C C doub 1.4 N Y
4 C8 C9 C C sing 1.38 N Y
5 C6 C7 C C sing 1.39 N Y
6 C9 C10 C C doub 1.38 N Y
7 C7 C11 C C doub 1.39 N Y
8 C10 C11 C C sing 1.4 N Y
9 N7 C3 N C sing 1.38 N N
10 C11 C12 C C sing 1.48 N N
11 N6 C2 N C sing 1.35 N Y
12 N6 C4 N C doub 1.3 N Y
13 C3 C2 C C sing 1.41 N Y
14 C3 N1 C N doub 1.33 N Y
15 C2 C1 C C doub 1.4 N Y
16 C4 N5 C N sing 1.36 N Y
17 O6 C15 O C sing 1.43 N N
18 N1 C18 N C sing 1.32 N Y
19 N4 C12 N C sing 1.35 N N
20 N4 S1 N S sing 1.66 N N
21 C12 O1 C O doub 1.22 N N
22 C15 C16 C C sing 1.55 N N
23 C15 C14 C C sing 1.54 N N
24 C1 N5 C N sing 1.37 N Y
25 C1 N2 C N sing 1.33 N Y
26 C13 C14 C C sing 1.53 N N
27 C13 O4 C O sing 1.43 N N
28 N5 C17 N C sing 1.46 N N
29 O3 S1 O S doub 1.42 N N
30 C16 C17 C C sing 1.55 N N
31 C16 O7 C O sing 1.43 N N
32 C18 N2 C N doub 1.32 N Y
33 C14 O5 C O sing 1.44 N N
34 S1 O4 S O sing 1.52 N N
35 S1 O2 S O doub 1.42 N N
36 C17 O5 C O sing 1.44 N N
37 C4 H1 C H sing 1.08 N N
38 C7 H7 C H sing 1.08 N N
39 C8 H8 C H sing 1.08 N N
40 C9 H9 C H sing 1.08 N N
41 C10 H10 C H sing 1.08 N N
42 N4 H11 N H sing 0.97 N N
43 C13 H12 C H sing 1.09 N N
44 C13 H13 C H sing 1.09 N N
45 C14 H14 C H sing 1.09 N N
46 C15 H15 C H sing 1.09 N N
47 O6 H16 O H sing 0.97 N N
48 C16 H17 C H sing 1.09 N N
49 O7 H18 O H sing 0.97 N N
50 C17 H19 C H sing 1.09 N N
51 C18 H20 C H sing 1.08 N N
52 N7 H21 N H sing 0.97 N N
53 N7 H22 N H sing 0.97 N N